Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1431 ATGCTCTCCAACCTTCCATCTTCCTCTTGGCCGGACCTTAACCCCAAGCCCTTCTGGGACGATACGCCCCCGCCGCCTTCCCACAGTTCCGCCGAGAATGTTGCGCTTCAGTACGATGACCAAGCCAGCCTGGCTTCCAAGTTCCGAAACCACCAGATCAGTAGTGACGGTGGTAACCCTTCTACCAAGTCGTCGACGACAGCTGCTTTGATGCTCCAGGCTCAGCAACAGCTTCTGATGTCCCGAGGTCTCGCCGGAACCGGTGACTCAGGACTCCTTCCGATGCCGTTGTCGTTGGGCCGCAGCGGAGATGTTGACCGCTCCAGAAACGACGTCGTCGACGGGTCTTCGTTCAAATCTCCTAATCCGGGTGGTGATAGTTCAGTTCAAGCCCTGTATAACGGATTCGCCAGTTCTCTGCATGGCGGTGGTCAAGTTCCGAATCAGACGCAGCAATTTCTTCATCCACAGGGCCAGAATCTGAGCGGTTCATCAGGCGGCGCAACGACCCAAATCCCGGCGAGCAGTACTCCTGCACAACCTAGGCAGAGAGTTAGGGCAAGGAGAGGTCAAGCCACGGACCCACACAGCATCGCCGAGAGGTTACGAAGGGAGAGAATCGCAGAGAGAATGAAGGCGCTGCAGGAGTTAGTTCCCAATGCTAACAAGACAGACAAGGCTTCGATGCTGGATGAGATCATCGACTATGTGAAGTTCCTACAGCTTCAAGTTAAGGTATTGAGTATGAGCAGGTTGGGCGGTGCCGCTGCTGTGGCTCCCCTTGTTGCTGATATGGCCTCTGAGGCAGGCGCTGCGGCAGCTGCTGCAGCAGGAGGCGACTGCGTTCAGGCTACAGCCAACGGTAGCCAGACGCCGTCGTCAACCTCCAACGACACCATCGCCATGACTGAGCATCAGGTGGCCAAGCTCATGGAGGATGACATGGGCTCCGCCATGCAGTACCTGCAGGGGAAGGGGCTCTGCCTCATGCCAATCTCCCTCGCCACCGCCATCTCCACCGCCACCTGTCACTCCCGGAACCACCTCGTCAACAACCACAGCCAGAAAGGGCCGTCGTCTCCCAGCATGTCGGTCTTGACCGTGCAGTCGGCGACGGCCGGTAACGGCGCCGCCGAGAGCTCCGTAAAAGAGGGGGTCTCTGTTTCGAAGCCGTGA 1176 0.5816 MLSNLPSSSWPDLNPKPFWDDTPPPPSHSSAENVALQYDDQASLASKFRNHQISSDGGNPSTKSSTTAALMLQAQQQLLMSRGLAGTGDSGLLPMPLSLGRSGDVDRSRNDVVDGSSFKSPNPGGDSSVQALYNGFASSLHGGGQVPNQTQQFLHPQGQNLSGSSGGATTQIPASSTPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMASEAGAAAAAAAGGDCVQATANGSQTPSSTSNDTIAMTEHQVAKLMEDDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNHLVNNHSQKGPSSPSMSVLTVQSATAGNGAAESSVKEGVSVSKP 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1431 391 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 43 338 - -
Acco04g1431 391 MobiDBLite consensus disorder prediction 114 182 - -
Acco04g1431 391 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 189 251 IPR036638 GO:0046983
Acco04g1431 391 Gene3D - 186 248 IPR036638 GO:0046983
Acco04g1431 391 MobiDBLite consensus disorder prediction 349 391 - -
Acco04g1431 391 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 191 240 IPR011598 GO:0046983
Acco04g1431 391 MobiDBLite consensus disorder prediction 1 41 - -
Acco04g1431 391 Pfam Helix-loop-helix DNA-binding domain 196 241 IPR011598 GO:0046983
Acco04g1431 391 MobiDBLite consensus disorder prediction 95 195 - -
Acco04g1431 391 MobiDBLite consensus disorder prediction 26 41 - -
Acco04g1431 391 MobiDBLite consensus disorder prediction 349 377 - -
Acco04g1431 391 SMART finulus 197 246 IPR011598 GO:0046983
Acco04g1431 391 FunFam Transcription factor bHLH66 188 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1431 Acco-ChrAcco04 16376146 16378986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1431 178 390 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 66.376 2.22e-94 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco04g1431 HLH 1.4e-09 No_clan