Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1425 ATGGGTGAAAAATCCAAAGATTCTTCCTCGTTGCTTCACGGGAAGTACGAGCTCGGTCGTCTTCTGGGTCACGGCACTTTCGCCAAGGTGTACCATGCCAAGAACTTGCAGAGCGGGAAGAGCGTGGCTATGAAGGTGGTTGGCAAGGAGAAAGTGATCAAAGTGGGCATGATGGAGCAAATGAAGAGGGAGATTTCTGTGATGAAGATGGTGGAGCATCCCAACATCGTTGAGCTTTTTGAGGTTATGGCGAGCAAATCCAAGATCTACATCGCTATGGAGCTCGTTCGCGGCGGCGAGCTCTTCAACAAGATCGCTAGAGGGCGCCTGAGGGAAGACGTCGCACGAGCCTATTTCCAGCAATTGATCTCCGCCATCGATTTCTGCCACAGTCGCGGTGTTTACCACCGCGATCTGAAGCCGGAGAATCTGCTTCTCGACGAGGATGGGAATTTGAAGGTCACCGATTTTGGCCTGAGCACTTTCGCTGAGCACTTGCGGCAAGACGGTTTGCTTCACACCACTTGTGGTACTCCAGCGTACGTGGCGCCGGAGGTAATCGGTAGGAAGGGGTACGACGGCGATAAGGCTGATATCTGGTCGTGTGGGGTCATCCTGTATGTGCTTCTCGCCGGATTTTTGCCCTTCCAGGATGACAACTTGATGGCTATGTACAAGAAAATCTACCGGGGAGATTTCAAATGCCCGCCGTGGTTCTCCTCCGACGCTCGCCGGCTGATAACGAAGCTCCTCGACCCGAACCCGAGTACCCGAATCACAATTTCCAAAATTATGGACTCGCCCTGGTTCAAAAAAACCATCCCAAAGAGCGTGGTGACGAAGGAGGAACAGGAATTCGATTCTGACAGCGAGAAATCAAAGCAGCAAGCACCGGCGACAATGAACGCGTTTCACATAATATCATTATCTCAAGGGTTCGATTTGTCTCCGTTGTTCGAAGAGAAGAAGAGGGAGGAGAAAGAGGAGATGAGATTCGCGACGATGAGGCCGGCGAGCAGCGTGATATCGAAGCTTGAAGAGGTGGCGAAGGCGGAGAAGTTCAACGTGAAGAAGAGCGACACAAGAGTGAGGTTGCAGAGACAAGAATGTGGAAGAAAAGGGAAGCTGGCGATTGCGGCCGACATATACGCCGTGACGCCGTCGTTCTTGGTGGTGGAGGTGAAGAAGGACAACGGTGACACCTTAGAGTACAACCAATTCTGCAGCAAAGAGCTCCGCCCTGCGCTTAAAGACATCCTCTGGACTTCGCCACCGGAAGGCTCCACTCTGGCTTGA 1296 0.5247 MGEKSKDSSSLLHGKYELGRLLGHGTFAKVYHAKNLQSGKSVAMKVVGKEKVIKVGMMEQMKREISVMKMVEHPNIVELFEVMASKSKIYIAMELVRGGELFNKIARGRLREDVARAYFQQLISAIDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSTFAEHLRQDGLLHTTCGTPAYVAPEVIGRKGYDGDKADIWSCGVILYVLLAGFLPFQDDNLMAMYKKIYRGDFKCPPWFSSDARRLITKLLDPNPSTRITISKIMDSPWFKKTIPKSVVTKEEQEFDSDSEKSKQQAPATMNAFHIISLSQGFDLSPLFEEKKREEKEEMRFATMRPASSVISKLEEVAKAEKFNVKKSDTRVRLQRQECGRKGKLAIAADIYAVTPSFLVVEVKKDNGDTLEYNQFCSKELRPALKDILWTSPPEGSTLA 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1425 431 Pfam Protein kinase domain 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1425 431 Gene3D Phosphorylase Kinase; domain 1 5 95 - -
Acco04g1425 431 FunFam Non-specific serine/threonine protein kinase 7 95 - -
Acco04g1425 431 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Acco04g1425 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Acco04g1425 431 Gene3D Transferase(Phosphotransferase) domain 1 96 297 - -
Acco04g1425 431 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 418 - -
Acco04g1425 431 SMART serkin_6 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1425 431 Gene3D Kinase associated domain 1, KA1 298 422 - -
Acco04g1425 431 FunFam Non-specific serine/threonine protein kinase 6 298 - -
Acco04g1425 431 CDD CIPK_C 302 417 - -
Acco04g1425 431 SUPERFAMILY Protein kinase-like (PK-like) 13 292 IPR011009 -
Acco04g1425 431 Pfam NAF domain 298 358 IPR004041 GO:0007165
Acco04g1425 431 ProSiteProfiles NAF domain profile. 296 320 IPR018451 GO:0007165
Acco04g1425 431 FunFam Non-specific serine/threonine protein kinase 296 421 - -
Acco04g1425 431 CDD STKc_SnRK3 15 269 - -
Acco04g1425 431 ProSiteProfiles Protein kinase domain profile. 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1425 Acco-ChrAcco04 16083845 16085140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1425 2 425 CBL-interacting serine-threonine protein kinases AT4G30960 75.926 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Acco04g1425 Pkinase 3.9e-75 CL0016