Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1419 ATGGGTTTGGGAATATTTTGCATTTGCTTTTGTTTGGTTCTGACGCTTTTCTTCGAGCATTTAGCATGCCAGCAACCTAATACAGATGGATTCTTTGTTTCTGAATTCTTGAAGAAAGGTTCTTCTTCTTCTTATTCAACTTTTTCCAAATCCCACAACTTGTCTGGTTCTTCTTTCTGTTCATGGCAGGGTGTTCTCTGTGATGCTGAAAAAGAGCACATTGTTGAGTTCAAAGCTTCTGGGTTAGGCCTCTCTGGGCCTGTTCCTCATAATACCATTGGCAAGCTCAACAAGCTTCAATCTTTGGATCTTAGCAGCAACAAGATCACCGGTTTGCCTTCAGATTTCTGGAGTTTAAGTTCTCTTAAGAGTCTTAACCTTTCTTCCAACCAGATTTCTGGTTCTTTGTCTAACAATATTGGCAATTTTGGTTCCTTGGAAACCTTAGACTTATCGAACAACAACCTCTCTGAAGAAATTCCAGAAGCTATAGGCTCTCTTGTCAGTCTTCGCATCCTCAACCTTAGCCGAAACCGATTCGAACACACCATACCTTCGGGGATTTTAAAGTGTCTGTCTCTAGTCTCCATTGATCTTTCATCGAATCGTCTAAATGGGACTCTTCCAAAGGGTCTTGGTGCTTCTTTTCCCAAGCTTCAAATGTTGAACCTCGCAGGGAATAGTATCCATGGTCAAGATTTTAACTTTTCTGGGTTGATTTCTATTACTACCCTCAACATGTCTGGAAATTTGTTTCAGGGTTCTGTAATGGGTGCATTTCAGGGAAGCTTGGAGGTCATTGATCTTAGCAAGAACCAATTTCAGGGTCATATTTCTCAAGTACAATTCAATTCTAACTTCAGTTGGTCTCGTTTAGTTTATCTGGATTTGTCTGAGAATCAGCTTAGTGGTGAAATTTTCCATAATTTGAACGAAGCCCAGAATCTGAAACACCTAAATCTTGCTCACAATAGATTTACCAGACACACATTCCCACAGATTAAGATGCTGTCTTTGTTGGAATACTTGAACTTGTCTAGAACCAGTCTTGTTGGTCACATTCCATATGAAATCTCACAACTGAAGCATTTGAATGCTTTGGATATCTCCATGAATCATCTCATTGGGAAAATCCCATTACTGAGCAACAAAAGCCTCCAAATTCTTGACCTTTCTATGAACAATTTGAGTGGTGGAATACCCCAATCTCTCTTAGACAAGCTCCCAGGAATGGCCAAGTATAACTTCTCTTATAACAACTTCACCTTTTGTGTTTCAACATTTACCCCTGAAATCCTCAAGATGGCATTCTATGGATCAGTTAACAGTTGCCCAATTGCTGTAAACCCCACAATTTTAAGAAAAAGAGGCACTGATCGAATTGGAATGAAGCTGGCTCTTGGATTGACTCTAGCAATGATCTTCCTTCTTGCTGGGCTTTTATTTCTAGCATTTGGCTGTAGAAGGAAGACAAAAATGTGGGCAGTGAAGCAATCTTCTTACAAAGAAGAACAGAACATCTCAGGACCCTTTGAATTTCAGACTGATTCAACAACCTGGGTGGCTGATGTCAAGCAAGCAACTTTGGTCCCAGTAGTGATTTTCGAGAAGCCATTGTTGAACATCACATTCGCAGACCTCTTGTCTGCAACTTCAAACTTTGATAGAGGTACCCTTTTGGCTGAAGGGAAGTTTGGGCCTGTTTACAGAGGCTTTCTCCCTGGTGGGATTCATGTAGCAGTTAAGGTTCTCGTTGTTGGTTCTACATTGACAGATCAAGAAGCTGCAAGGGAGCTCGAGTACCTCGGTTGTATCAAGCATCCGAATCTTGTTCCTTTAACTGGTTATTGCCTAGCTGGAGATCAGAGGATTGCTATATATGAGTACATGGAAAATGGGAACCTGCAAAACTTGCTCCATGACTTGCCACTTGGGGTGCATAGTCCAGAAGATTGGAGCACAGACACGTGGGAGGAAGATGACAATGGTGGTGGGATTCAAAATGTGGGCTCCGAGGGATTGCTCACATCTTGGAGATTTCGTCACAAGATTGCCCTTGGCACTGCTCGAGCACTGGCCTTTCTTCACCATGGCTGCTCGCCTCCGATCATTCACAGAGATGTCAAGGATAGTAGTGTTTATCTGGACTACAACCTAGAGCCAAGGTTGTCTGATTTTGGTCTAGCTAAGGTTTTTGGAGATGGCTTGGATGAGGAAATTGCGCTTGGCTCGCCTGGTTATGTTCCACCAGAGTTTTCCCAACCTGGACAGAACTCCCCAACGCAGAAATCTGATGTATACTGTTTTGGGGTTGTGCTGTTTGAACTGATAACTGGTAAGAAACCTGTTGGGGATGATTATCATGATGGAAAGGAAGGAACTTTGGTTAGTTGGGTTAGAGGACTGGTGAGAAAGAATGAAGCTTCAAGAGCCATTGATCCGAAAATCCGCGAGACGGGTTCAGAAGAACAAATGGAGGAGGCCATCAAGATTGGTTATCTTTGCACGGCTGATCTTCCATTGAAGCGACCAAGCATGCAGCAAGTAGTTGGGCTGCTTAAAGATATTGAGCCTTCTGCAACTTAG 2586 0.4258 MGLGIFCICFCLVLTLFFEHLACQQPNTDGFFVSEFLKKGSSSSYSTFSKSHNLSGSSFCSWQGVLCDAEKEHIVEFKASGLGLSGPVPHNTIGKLNKLQSLDLSSNKITGLPSDFWSLSSLKSLNLSSNQISGSLSNNIGNFGSLETLDLSNNNLSEEIPEAIGSLVSLRILNLSRNRFEHTIPSGILKCLSLVSIDLSSNRLNGTLPKGLGASFPKLQMLNLAGNSIHGQDFNFSGLISITTLNMSGNLFQGSVMGAFQGSLEVIDLSKNQFQGHISQVQFNSNFSWSRLVYLDLSENQLSGEIFHNLNEAQNLKHLNLAHNRFTRHTFPQIKMLSLLEYLNLSRTSLVGHIPYEISQLKHLNALDISMNHLIGKIPLLSNKSLQILDLSMNNLSGGIPQSLLDKLPGMAKYNFSYNNFTFCVSTFTPEILKMAFYGSVNSCPIAVNPTILRKRGTDRIGMKLALGLTLAMIFLLAGLLFLAFGCRRKTKMWAVKQSSYKEEQNISGPFEFQTDSTTWVADVKQATLVPVVIFEKPLLNITFADLLSATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVVGSTLTDQEAARELEYLGCIKHPNLVPLTGYCLAGDQRIAIYEYMENGNLQNLLHDLPLGVHSPEDWSTDTWEEDDNGGGIQNVGSEGLLTSWRFRHKIALGTARALAFLHHGCSPPIIHRDVKDSSVYLDYNLEPRLSDFGLAKVFGDGLDEEIALGSPGYVPPEFSQPGQNSPTQKSDVYCFGVVLFELITGKKPVGDDYHDGKEGTLVSWVRGLVRKNEASRAIDPKIRETGSEEQMEEAIKIGYLCTADLPLKRPSMQQVVGLLKDIEPSAT 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1419 861 FunFam Leucine-rich repeat receptor protein kinase EMS1 138 235 - -
Acco04g1419 861 Pfam Leucine rich repeat 142 180 IPR001611 GO:0005515
Acco04g1419 861 Pfam Leucine rich repeat 91 132 IPR001611 GO:0005515
Acco04g1419 861 ProSiteProfiles Leucine-rich repeat profile. 145 167 IPR001611 GO:0005515
Acco04g1419 861 ProSiteProfiles Protein kinase domain profile. 554 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1419 861 Pfam Leucine Rich repeat 382 398 IPR001611 GO:0005515
Acco04g1419 861 FunFam Putative LRR receptor-like serine/threonine-protein kinase 515 629 - -
Acco04g1419 861 FunFam Calmodulin-binding receptor kinase CaMRLK 262 380 - -
Acco04g1419 861 Gene3D Ribonuclease Inhibitor 35 185 IPR032675 -
Acco04g1419 861 Gene3D Ribonuclease Inhibitor 286 382 IPR032675 -
Acco04g1419 861 Pfam Protein kinase domain 558 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1419 861 PRINTS Leucine-rich repeat signature 99 112 - -
Acco04g1419 861 PRINTS Leucine-rich repeat signature 119 132 - -
Acco04g1419 861 Gene3D Ribonuclease Inhibitor 383 434 IPR032675 -
Acco04g1419 861 Gene3D Transferase(Phosphotransferase) domain 1 630 861 - -
Acco04g1419 861 SUPERFAMILY Protein kinase-like (PK-like) 532 853 IPR011009 -
Acco04g1419 861 ProSiteProfiles Leucine-rich repeat profile. 98 119 IPR001611 GO:0005515
Acco04g1419 861 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 290 423 - -
Acco04g1419 861 Gene3D Phosphorylase Kinase; domain 1 514 629 - -
Acco04g1419 861 Gene3D Ribonuclease Inhibitor 186 285 IPR032675 -
Acco04g1419 861 SUPERFAMILY L domain-like 58 431 - -
Acco04g1419 861 SMART LRR_typ_2 337 361 IPR003591 -
Acco04g1419 861 SMART LRR_typ_2 239 262 IPR003591 -
Acco04g1419 861 SMART LRR_typ_2 119 142 IPR003591 -
Acco04g1419 861 SMART LRR_typ_2 143 166 IPR003591 -
Acco04g1419 861 SMART LRR_typ_2 96 118 IPR003591 -
Acco04g1419 861 SMART LRR_typ_2 167 191 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1419 Acco-ChrAcco04 15938913 15941498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1419 73 856 Receptor kinase-like Gene Family AT5G07280 32.506 4.26e-111 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Acco04g1419 Pkinase 8.6e-32 CL0016