Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1417 ATGGCTGACCGGGAGAGCTCCGGAGCTCTCATAGACGGTAACTCTGAACTGCGAAAAGACAACGAATCGTCTGAAGGAGAAGGAAAAGAAGGAAAGAGAGAGGAAATAAATCGAGTCTCTGAAGCACGGCCTAGCGAGTCTCAGCGAGTCGACTTGCAGAATTCTGAACCTTCCCGGGAAGCAGAGCCACCGGAGCCTAATTCGAAAACCCTAGCTGTGCCCACTTCTCTTGAACACGATGAGAAAGATCAGAGTGCTGATTTGCAGGCGAGCTCGACTACGCAGGAGGCTGTAAAAGGCGGAAATAAGGAGTCAGTTGGACCTTCTGACAAGGAACTTACTGAAAGAGAATCAGTCCAAACAACTCAACCACAGATAGAAGATCAACCTCAGGTGTCCGTGTGTTCAAGTGCATTGTCTGAACTGTCACCAACATCTGTAACCCAATCTTTATCATCTGCTCCTAGTCCTGCTGTACCAGAACAAAGACACTGTTCTCCCAAGGCTAATAACACAAATATGCTGGAAGCATACAAGAACAAGCCTTCTCGCTGTAATGCTTTATCTCCTGTTTCTGTTGTGAGGGCATCCTCATCTGATGGATACAATTGGCGGAAGTATGGCCAGAAGCAAGTTAAAAGCCCTACAGGTTCTCGAAGCTATTACAGGTGTACTCACTCTGAATGTTGTGCTAAGAAGATTGAATGCTGTGACCATTCAGGCCATGTAGTAGAGGTTGTTTATAAAAGTCAACACAGCCATGATCCGCCACGGAAGACTAACTACAGTAGAGAAAGTAAGTTCGTGCCATCCAAACAACCTAACATGGAGAACATCGTTCTAGAGAAGCCCATCAGAGTTTCCAATGATTCAAATACATGCCCTTCTTCAAAGCAACCTCCACAAGAAGTACCATGCAGTGCAGATGGGAAAAGACACAACGCATCTGATCAAAGAGATAATGGTAAAGTTGACTTGAAGGATGAGCATGTTATTGAGACAGAACCCAAAAAAAGAGTGAAGAAAGGTGACTATGCATGCCTTGATTCTCCTGTAAAACCTGGAAAGAAACAGAAGTTTGTTGTACATGCAGCAGGAGATGTGGGGATATCGGGTGATGGATATCGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGAAACCCTCATCCAAGAAACTACTACAGATGCACTTCAGCTGGATGCCCTGTCCGTAAGCACATCGAAACTGCTGTAGATAACTCTAATGCTGTAATCATTACATACAAGGGAGTTCATGACCATGACATGCCTGTGCCTAAGAAACGGCATGGCTCACCAAGTGCTCCTCTTGTGGCTGCAGCAGCCCCCACTTCAATGAACAATTCACAGCAGTTCAAGAAAATAGACAAACTGCAGAAGCAAAAATCTTCTACCCAGTGGTCGGTGGACACAGAAGGCGAATTAACTGGGGAAGCCTTAGAACTTGGTGAGAAAGCAATGGAATCAGCTCGAACTCTCTTGAGCATCGGTTTCGAAATAAAGCCTTGCTGA 1533 0.4553 MADRESSGALIDGNSELRKDNESSEGEGKEGKREEINRVSEARPSESQRVDLQNSEPSREAEPPEPNSKTLAVPTSLEHDEKDQSADLQASSTTQEAVKGGNKESVGPSDKELTERESVQTTQPQIEDQPQVSVCSSALSELSPTSVTQSLSSAPSPAVPEQRHCSPKANNTNMLEAYKNKPSRCNALSPVSVVRASSSDGYNWRKYGQKQVKSPTGSRSYYRCTHSECCAKKIECCDHSGHVVEVVYKSQHSHDPPRKTNYSRESKFVPSKQPNMENIVLEKPIRVSNDSNTCPSSKQPPQEVPCSADGKRHNASDQRDNGKVDLKDEHVIETEPKKRVKKGDYACLDSPVKPGKKQKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSNAVIITYKGVHDHDMPVPKKRHGSPSAPLVAAAAPTSMNNSQQFKKIDKLQKQKSSTQWSVDTEGELTGEALELGEKAMESARTLLSIGFEIKPC 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1417 510 MobiDBLite consensus disorder prediction 118 169 - -
Acco04g1417 510 MobiDBLite consensus disorder prediction 285 303 - -
Acco04g1417 510 MobiDBLite consensus disorder prediction 15 45 - -
Acco04g1417 510 ProSiteProfiles WRKY domain profile. 199 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco04g1417 510 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 137 463 IPR044810 GO:0003700
Acco04g1417 510 SMART WRKY_cls 198 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco04g1417 510 SMART WRKY_cls 371 430 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco04g1417 510 MobiDBLite consensus disorder prediction 1 169 - -
Acco04g1417 510 Gene3D WRKY domain 189 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco04g1417 510 Gene3D WRKY domain 356 432 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco04g1417 510 ProSiteProfiles WRKY domain profile. 366 431 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco04g1417 510 SUPERFAMILY WRKY DNA-binding domain 197 257 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco04g1417 510 SUPERFAMILY WRKY DNA-binding domain 367 431 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco04g1417 510 Pfam WRKY DNA -binding domain 373 428 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco04g1417 510 Pfam WRKY DNA -binding domain 200 254 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco04g1417 510 MobiDBLite consensus disorder prediction 249 323 - -
Acco04g1417 510 FunFam WRKY transcription factor 356 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1417 Acco-ChrAcco04 15917348 15924526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1417 125 510 WRKY Transcription Factor Family AT4G30935 54.660 1.37e-126 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco04g1417 WRKY 1.7e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g1417 04 15917348 15924526 Acco04g1417 04 15917348 15924526 ECH