LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco04g1407	ATGGCATTGAAAATCCAAGTTCTGAATCTATGGTTGTTGTTGTCGATGCTGGGCCTTTACGCGGCTTCGGCTTCGTCGTCGTATTCCGGTGGTGTTCCCAAAGAGCAAGAGGACGATCGAATCTCGGCCCTTCCCGGGCAGCCGGAAGTCCCGTTTTCTCAATTCTCCGGCTACGTCACTGTCAACGAAGAGCACGGCCGAGCTCTGTTTTACTGGTTGACGGAGGCTTACACTTCCCCTCACACCAAGCCTCTTGTTCTCTGGGTCAATGGAGGGCCAGGTTGCTCATCAGTGGCATATGGGGCATCAGAGGAAATTGGACCATTCCGGTTAAATAAAACTGGTTCTTCGTTGTATCTTAACAAGTATTCATGGAACAGAGAAGCGAATATTCTCTTTCTTGAATCGCCTGCTGGTGTAGGTTTCTCCTACACAAATACAAGCTCTGACCTCAAAACTTCTGGGGACGAAAGGACAGCTCAGGATGCTCTAATTTTTCTAATCAGATGGATGTCAAGATTCCCACAATATAAGTACAGAGACTTTTACATTTCTGGAGAGAGTTATGCAGGACACTATGTTCCCCAGTTGGCTCAAAAAATTTACCATTATAATAAAGCCAATCCCCAGATTATTAATCTCAAAGGTTTCATTGTGGGAAATGCTGTGACTGATAACTACTACGATGGGATTGGAACTGTGACATATTGGTGGAGCCATTGTATGATATCTGATAAATCATACAAAACTATCCTCAAACACTGCAATTTCACGGCGGAGCAAACATCTAAAATATGTGATGATGCTGTCCGTTATGCAGTTAAGCATGAATTTGGACGCATTGATCAGTACAGTATTTATACGCCTACATGCGGTAGCAACAGTACTGTACAGTACAAAAGGCTTAAGAGTACAATATTACATAGGATTTCAGGGTATGATCCATGCACTGAAAATTATGCAGAGAAATACTATAATCTCCCTGAAGTGCAAAAAGCCATGCATGCAAATGTTACAGGAGTTCCTTACAAATGGACTGCATGCAGTGATGTGCTCTTAAAATACTGGAACGACTCTGCAGTTTCTGTATTGCCCATTTACAAGGAGTTAATTGCAGCTGGCTTAAGGATTTGGGTTTTCAGTGGGGACACAGATTCAGTGGTTCCAGTGACTGCTACTAGATTTTCCCTCGACAGTCTTAAGCTCAAGATCAATACTCGTTGGTACCCATGGTACACTGGTGGACAGGTTGGTGGATGGACAGAGGTCTATGATGGGCTAACCTTTGCTGCAGTACGAGGAGCAGGGCATGAGGTGCCATTGTTTCAGCCAAGAAGAGCTTTAATTATGTTCAAGTCATTCTTGGAAGGAAAGAAGCTTCCAACATCTTGA	1392	0.4375	MALKIQVLNLWLLLSMLGLYAASASSSYSGGVPKEQEDDRISALPGQPEVPFSQFSGYVTVNEEHGRALFYWLTEAYTSPHTKPLVLWVNGGPGCSSVAYGASEEIGPFRLNKTGSSLYLNKYSWNREANILFLESPAGVGFSYTNTSSDLKTSGDERTAQDALIFLIRWMSRFPQYKYRDFYISGESYAGHYVPQLAQKIYHYNKANPQIINLKGFIVGNAVTDNYYDGIGTVTYWWSHCMISDKSYKTILKHCNFTAEQTSKICDDAVRYAVKHEFGRIDQYSIYTPTCGSNSTVQYKRLKSTILHRISGYDPCTENYAEKYYNLPEVQKAMHANVTGVPYKWTACSDVLLKYWNDSAVSVLPIYKELIAAGLRIWVFSGDTDSVVPVTATRFSLDSLKLKINTRWYPWYTGGQVGGWTEVYDGLTFAAVRGAGHEVPLFQPRRALIMFKSFLEGKKLPTS	463

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco04g1407	463	ProSitePatterns	Serine carboxypeptidases, histidine active site.	427	444	IPR033124	GO:0004185
	Acco04g1407	463	ProSitePatterns	Serine carboxypeptidases, serine active site.	184	191	IPR018202	GO:0004185
	Acco04g1407	463	Pfam	Serine carboxypeptidase	46	457	IPR001563	GO:0004185\|GO:0006508
	Acco04g1407	463	Gene3D	alpha/beta hydrolase	35	293	IPR029058	-
	Acco04g1407	463	FunFam	Carboxypeptidase	363	457	-	-
	Acco04g1407	463	Gene3D	-	363	457	-	-
	Acco04g1407	463	FunFam	Carboxypeptidase	35	293	-	-
	Acco04g1407	463	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	41	444	IPR001563	GO:0004185\|GO:0006508
	Acco04g1407	463	Gene3D	-	316	353	-	-
	Acco04g1407	463	SUPERFAMILY	alpha/beta-Hydrolases	35	461	IPR029058	-
	Acco04g1407	463	PRINTS	Carboxypeptidase C serine protease (S10) family signature	427	440	IPR001563	GO:0004185\|GO:0006508
	Acco04g1407	463	PRINTS	Carboxypeptidase C serine protease (S10) family signature	121	133	IPR001563	GO:0004185\|GO:0006508
	Acco04g1407	463	PRINTS	Carboxypeptidase C serine protease (S10) family signature	170	195	IPR001563	GO:0004185\|GO:0006508
	Acco04g1407	463	PRINTS	Carboxypeptidase C serine protease (S10) family signature	134	144	IPR001563	GO:0004185\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco04g1407	Acco-ChrAcco04	15698109	15705408	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco04g1407	321	460	Calmodulin-binding Proteins	AT2G22960	29.787	1.03e-14	70.5

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Acco04g1407	04	15698109	15705408	Acco04g1407	04	15698109	15705408	ECH