Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1390 ATGCAGCAAGGTGATCAAACGGTGATAAGCTTGAGGCCTGGTGGCGGTCGAGGCGGCGGCGGAAACAGGCTATTCGGTCCTCGACACGAGTCCACGTCATCCGCATCTTCTACTTTCCCTGCCTTCGGATCATTTTCCTCTGATCTCCCAGTCTTGCACCCCCATGGCGGTGCTCCGTCATCATTCTCTATTAAGGCTGGTGATTCTCGGTTTGATGGTCGTGAACGGATGCGATACACCAGAGATCAACTGTTACAGCTTAGAGAGGTTGTCGAGGTCCCTGATGATATTATAAAAATCAAACAGGAAATAGAAGCTGAGCTTTTTGGCGAAGATCAAAGCTGGGTTCGTGCGGAAAGCAATCCCCCGCATCAAGTTCAGAATCGATATTCTGAGCCAGATAACCGTGACTGGCGTGGCCGGTCTGGACAACTTTCTCCTGCCGAAGAAAGATCTTGGGACAATATAAGGGAGAATAGAGAATTTGGCAACCGATATGACTCAAGGCAGCCAGATGCCAGCCAGATTAATCGCCAAGACCAGCTGAGTTTTGCAATGGGAGGAACTGCTCCTACTCTAGTGAAGGCTGACGTGCCATGGTCAGCTAGAAGGGGAAGTCTTTCTGAGAAGGATCGTGTCTTGAAGACTGTGAAAGGGATTCTAAATAAGTTGACTCCTGAGAAATTTGATCTCCTGAAGGGTCAATTGATTGATGCTGGCATTACATCAGCTGACATCTTGAAGGATGTCATTTGGCTTATATTTGATAAGGCAGTGCTTGAACCAACGTTTTGCCCCATGTATGCTCTTCTGTGTTCTGATCTTAATGAAAAGTTGCCACCATTCCCTTCTGAAGAACCTGGTGGGAAAGAAATCACTTTTAAGAGAATACTCTTAGATAACTGCCAGGAGGCCTTTGAAGGTGCTGATAAATTGAGGGAAGAAGTTAGGCAGATGACTGCCCCTGAGCAGGAGATGGAGCGCAATGATAAGGAAAGACTGGTTAAGCTTCGTACTTTGGGAAACATTCGATTAATTGGGGAGCTCTTAAAGCAGAAGATGATTCCTGAAAGAATTGTCCATCACATTGTTCAGGAGCTTTTAGGACCAGCTGATAACAAGGCCTGTCCCGTTGAGGAAAATGTTGAAGCTATATGTCAGTTTTTCAACACTATTGGTAAGCAGCTTGAGGAAAGCCCAAAATCACGGCGTATAAATGATATGTACTTTAGCCGATTGAAGGAATTGAGTGCTAATCCTCAACTCGCACCGCGGTTGAGGTTCATGATTCACAATATTCTAGATTTGCGTAAAAATAACTGGGTTCCAAGGCGTGAAGAGGTAAAAGCCAAAACCATCACTGAAATCCATTCGGAGGCTGAGAAAAATCTTGGATTGCGCCCAGGTGCCACTGCTAGCATTAGAAATACCCGCAATGTTCAAGGAAATGCCTCTCCTGGAGGATTCCCCATTGCTCGACCTGGTGCTGGAGGCATGATGCCTGGAATGCCAGGGACCAGGAAGATGCCAGGGATGCCTGGAATTGATAATGACAATTGGGAGATCCCTAGGAATCGATCAATGCCAAGAGGAGATTTGTCAGTTGTGCAACCAACTGCACATGGTCAATCTCCTTTACTTTCCAAGTCAGCTGCCCTGAGCTCGAAGTTGCTACCTCAAGGTAGTGGTGGTTTTATAAGTGGAAGAAGCAGTGCCCTAGTTCATGGAGGTGCTCGTGCTTCTCCCACAATCCCGTCAAACTTTGGTTCAGTTGGTGAGGCTCCGCCAGTAAAAGTTGCTCCTGCCATGTCCTCTGAGAAGCCTCCGCCTCCTGTGCCAAAAATGAATACCGATGAACTTCAGCGCAAAACCCGGTCTCTTCTAGAAGAATACTTTAGTGTTAGGCTTTTGGATGAGGCATTACAGTGTGTGGATGAACTAAAATCCCCTGCTTACCACCCTGAGGTTGTCAAGGAAACCATTTCCCTGGCACTTGATAGAAGCCCTCCATGCGTTGAACCTGTTGCCAATCTTCTGGAGTATCTTCTCATTAGAAGGGTTCTTACCGCAAGAGACATAGGCACTGGGTGTTTGCTATTTGCTTCCTTGCTCGATGATATTGGCATAGATTTACCAAAAGCTCCTAACAACTTTGGTGAGATAATCGGGAAACTAGTTTTAGCCGGGGGATTGGATTTTAAGGTGGTGAAAGAGATTCTTAAGAAAGTGGAAGATGACCTGTTCCAGAAAGTCATATTTGATGCTGCAAAACGGGTCATTGCTTCGTCATCTGGGCAATCTGTTTTGGAGTCACAAGCATCTGATATTGAAGCCTGCCTGAGTCTGTTGAAGTGA 2355 0.4633 MQQGDQTVISLRPGGGRGGGGNRLFGPRHESTSSASSTFPAFGSFSSDLPVLHPHGGAPSSFSIKAGDSRFDGRERMRYTRDQLLQLREVVEVPDDIIKIKQEIEAELFGEDQSWVRAESNPPHQVQNRYSEPDNRDWRGRSGQLSPAEERSWDNIRENREFGNRYDSRQPDASQINRQDQLSFAMGGTAPTLVKADVPWSARRGSLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDAGITSADILKDVIWLIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSEEPGGKEITFKRILLDNCQEAFEGADKLREEVRQMTAPEQEMERNDKERLVKLRTLGNIRLIGELLKQKMIPERIVHHIVQELLGPADNKACPVEENVEAICQFFNTIGKQLEESPKSRRINDMYFSRLKELSANPQLAPRLRFMIHNILDLRKNNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASIRNTRNVQGNASPGGFPIARPGAGGMMPGMPGTRKMPGMPGIDNDNWEIPRNRSMPRGDLSVVQPTAHGQSPLLSKSAALSSKLLPQGSGGFISGRSSALVHGGARASPTIPSNFGSVGEAPPVKVAPAMSSEKPPPPVPKMNTDELQRKTRSLLEEYFSVRLLDEALQCVDELKSPAYHPEVVKETISLALDRSPPCVEPVANLLEYLLIRRVLTARDIGTGCLLFASLLDDIGIDLPKAPNNFGEIIGKLVLAGGLDFKVVKEILKKVEDDLFQKVIFDAAKRVIASSSGQSVLESQASDIEACLSLLK 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1390 784 Pfam MIF4G domain 214 440 IPR003890 GO:0003723|GO:0005515
Acco04g1390 784 SMART if4_15 214 440 IPR003890 GO:0003723|GO:0005515
Acco04g1390 784 FunFam Eukaryotic translation initiation factor isoform 4G-2 205 441 - -
Acco04g1390 784 ProSiteProfiles MI domain profile. 619 741 IPR003891 -
Acco04g1390 784 SUPERFAMILY ARM repeat 208 443 IPR016024 -
Acco04g1390 784 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 61 772 IPR045208 GO:0003743
Acco04g1390 784 FunFam Eukaryotic translation initiation factor isoform 4G-2 613 774 - -
Acco04g1390 784 Gene3D - 205 441 - -
Acco04g1390 784 Pfam MA3 domain 620 732 IPR003891 -
Acco04g1390 784 SUPERFAMILY ARM repeat 613 763 IPR016024 -
Acco04g1390 784 MobiDBLite consensus disorder prediction 1 38 - -
Acco04g1390 784 Gene3D - 612 782 - -
Acco04g1390 784 MobiDBLite consensus disorder prediction 115 156 - -
Acco04g1390 784 SMART ma3_7 620 732 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1390 Acco-ChrAcco04 15356238 15361988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1390 1 782 Eukaryotic Initiation Factors Gene Family AT5G57870 64.295 0.0 961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g1390 04 15356238 15361988 Acco04g1390 04 15356238 15361988 ECH