Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1382 ATGGGTTTATGTAGATTTTCCTTGTTTGCTTTTTTCTCCGTAGTCGTTGTTTATTTATTAGGAGCTCATGGGGAAGAAAAAGCTGGCCTTGTGAGTGATAAAAGTTCTCTGATATCATTCATGAGAGGCATTGTTTCTGACCCAAAGAACACTCTAGCAAGCTGGAAATCTCCGGAAATTCATGTCTGTAATTGGTCCGGCATAAGATGCAACAATGCAAGTGATAGAGTCATAGAGATTAATCTCAATGGGAAATCACTAGGAGGAACAATTTCCCCTTCTATTTCCAACCTCTCTTCCTTGAAAATTCTTGATCTTTCTGAGAATTTCTTTGTGGGTCACATTCCAAAAGAGTTAGGCTTCTTAATTCAACTAGGGCAACTCAGTTTATCTTGGAATTTCCTTGAAGGAGAAATCCCAGCTGAGATGGGTTCACTTCATAACTTATACTACCTTGACTTGGGAAGCAACCAGCTTCATGGTGAGATTGCAGCTTCACTTTTCTGTAATGGGTCCTACTCATTGAGGTATATAGACCTCTCTAACAATTCCTTAGGGGGTCATATACCATTGAACAATGAGTGCATGCTTTTAGAGGTTGCGTTCCTCTTACTTTGGTCTAACAAGCTAGTTGGCCAAATTCCTCTTGCTCTTTCTAACTCCACACAGCTCAAATGGCTTGATTTGGAGTCAAATATGCTGAGTGGAGAGTTACCACATGAGATTGTAAGTTGGCCTGAACTACAATTCCTTTATTTGTCAGATAATGACTTTGTTAGCCATGATGGAAACACCAACCTTGAACCTTTCTTTGCTTCTTTGAGAAATTTGTCTAACCTTCAAGAACTTGAATTAGCAGAAAACAATCTTGGTGGGAAGCTTCCTTCTAACATTGGTGATCTTCCTAAAAGCCTTGTACAGCTTCACCTTGAAAACAATCTCATTTATGGCCCTATTCCTCCTCAAATATCCAACCTTGTTAACCTGACTCTTTTGAATTTTTCCAGTAATCTACTAAATGGTTCTATTCCTCCTAGCCTATGCAAGATGGGAAAGCTTGAGAGAATCTTTTTGTCCAATAATTCACTCTCTGGTGAGATTCCTTCAGCACTTGGCGGCATTCAACATCTGGGCCTTCTAGACTTGTCAAGAAACAAGCTTTCTGGTTCTATACCGGATAGTTTTGCTAACCTTCCTCAGTTAAGAAGGCTTTTGCTTTATGAAAACCAGCTTTCTGGAACAATCCCGCTGAGTCTCGGCAAATGCGTCAATTTGGAGATTTTGGACCTATCAAGAAACAGAATTTCCGGGGTGATTCCTGCTGAAGTTGCTGCCTTGGCTAGCTTGAAACTATACTTGAACTTATCAAGCAACAACTTAATTGGCTCTTTACCATTAGAGCTCAGCAAAATGGACATGGTGCTAGCTATCGATTTATCTAACAACAATCTCTCAGGCAGAATCCCACCTCAACTTGAAAGCTGCATAGCTTTAGAATACCTCAACCTTTCTGGCAACTCCTTAGAGGGCCCTCTTCCTTTTTCATTCGGCCAATTGCCTTACATAAAGGCACTTGATGTCTCTTCAAATAGGTTAACTGGGGCGATACCGGAGTCCCTTCTGTTATCATCCACTCTGAAGAACCTCAATTTCTCCTTCAACAAGTTCTCAGGGAATATACCAAACAAAGGAGCAATTTCATCTCTCACCATAGACTCTTTCCTAGGAAATGATGCTCTATGTGGTTCCATAAAAGGGATGCAAAGCTGCAACAAGAAACACAACTATCATTTTGTTCTCCTTATAATACCTGTGTTTCTATTTGCCACTCCCCTCTTGTGCATGCTTGGCTACCGGTTGGCGCGCTGGGCGAAACTTCAAAGGCGAATGGTGATATTTGGCAGAAAAAACTATGAGAATGATGAAGAGGAAACAGAGCAGCTAAAGTACCCAAGCATTTCATATAAACAACTTATTGAAGCCACTGGAGGCTTCAGTTCTTCAAGCTTAATTGGTTCAGGAAGATTTGGGCATGTCTACAAAGGTGTCCTTAGAGATAACACCAGAATAGCAGTGAAGGTGTTAGATACCACCACAGCATGTGAATTTTCAGGGAGTTTTAAAAGAGAGTTTCAAATTTTGAAAAGGACTAGGCACAGAAACTTGATAAGGATCATCACAGTTTGCAGCAAGCCAGAGTTTAAGGCTCTTGTTCTTCCTTTAATGCCAAATGGAAGCCTTGAGAGGCACCTATATCCAAGCCATGGGTTGAGCCACAGGTTAAATTTAGTTCAGATAGTGAGGATTTGTAGTGATGTGGCTGAAGGAATGGCCTATTTGCACCACTACTCACCAGTAAGAGTGGTCCACTGCGATCTCAAGCCAAGCAATATACTTCTCGACGATGATATGACAGCTTTGGTTACTGATTTTGGAATTGCAAGGCTTGTTAAAGGTGATGAGAATATGGCTTTGAATAATAGCTCGGCATCTTTCAGTTCAACACATGGCTTGTTGTGCGGTTCTGTTGGCTATATAGCCCCTGAGTATGGAATGGGGAAACAAGCATCAACTCAAGGCGATGTATATAGTTTTGGAGTGTTACTACTAGAAATAGTGACAGGTAGGCCTCCCACAGATGTTCTTGTCCATGAAGGCTCAAGTTTGCATGAGTGGATAAAGAGACAATACCCATACAAGCTAGACAACATTGTTGACAAGGCATTACAAAGGTTGTCACATTATTCTGGTCAACAAGACAGCAGCAAGTTCTGGCAAAATGTGGTACTTGAACTCATAGAACTGGGACTCCTCTGCACACAGTATAATCCTTTCACAAGGCCTAGCATGTTGGATGTGGCTCAAGAAATGGGCAAGTTGAAGGATTACTTGTGTAATAATCCATCATCCTCTTTGCTAATTGATGAAGCTGTCAACTCTAAGGTTAATGATTCCTTTCGTAGTGAAGATAATTTACTTGAAAAATAA 2988 0.4086 MGLCRFSLFAFFSVVVVYLLGAHGEEKAGLVSDKSSLISFMRGIVSDPKNTLASWKSPEIHVCNWSGIRCNNASDRVIEINLNGKSLGGTISPSISNLSSLKILDLSENFFVGHIPKELGFLIQLGQLSLSWNFLEGEIPAEMGSLHNLYYLDLGSNQLHGEIAASLFCNGSYSLRYIDLSNNSLGGHIPLNNECMLLEVAFLLLWSNKLVGQIPLALSNSTQLKWLDLESNMLSGELPHEIVSWPELQFLYLSDNDFVSHDGNTNLEPFFASLRNLSNLQELELAENNLGGKLPSNIGDLPKSLVQLHLENNLIYGPIPPQISNLVNLTLLNFSSNLLNGSIPPSLCKMGKLERIFLSNNSLSGEIPSALGGIQHLGLLDLSRNKLSGSIPDSFANLPQLRRLLLYENQLSGTIPLSLGKCVNLEILDLSRNRISGVIPAEVAALASLKLYLNLSSNNLIGSLPLELSKMDMVLAIDLSNNNLSGRIPPQLESCIALEYLNLSGNSLEGPLPFSFGQLPYIKALDVSSNRLTGAIPESLLLSSTLKNLNFSFNKFSGNIPNKGAISSLTIDSFLGNDALCGSIKGMQSCNKKHNYHFVLLIIPVFLFATPLLCMLGYRLARWAKLQRRMVIFGRKNYENDEEETEQLKYPSISYKQLIEATGGFSSSSLIGSGRFGHVYKGVLRDNTRIAVKVLDTTTACEFSGSFKREFQILKRTRHRNLIRIITVCSKPEFKALVLPLMPNGSLERHLYPSHGLSHRLNLVQIVRICSDVAEGMAYLHHYSPVRVVHCDLKPSNILLDDDMTALVTDFGIARLVKGDENMALNNSSASFSSTHGLLCGSVGYIAPEYGMGKQASTQGDVYSFGVLLLEIVTGRPPTDVLVHEGSSLHEWIKRQYPYKLDNIVDKALQRLSHYSGQQDSSKFWQNVVLELIELGLLCTQYNPFTRPSMLDVAQEMGKLKDYLCNNPSSSLLIDEAVNSKVNDSFRSEDNLLEK 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1382 995 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 742 969 - -
Acco04g1382 995 ProSitePatterns Protein kinases ATP-binding region signature. 671 693 IPR017441 GO:0005524
Acco04g1382 995 SUPERFAMILY Protein kinase-like (PK-like) 643 955 IPR011009 -
Acco04g1382 995 SUPERFAMILY L domain-like 36 260 - -
Acco04g1382 995 Gene3D Ribonuclease Inhibitor 31 196 IPR032675 -
Acco04g1382 995 Gene3D Transferase(Phosphotransferase) domain 1 742 972 - -
Acco04g1382 995 Pfam Protein kinase domain 667 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1382 995 SUPERFAMILY L domain-like 324 582 - -
Acco04g1382 995 Pfam Leucine Rich Repeat 498 518 IPR001611 GO:0005515
Acco04g1382 995 ProSiteProfiles Protein kinase domain profile. 665 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1382 995 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 31 190 - -
Acco04g1382 995 Pfam Leucine rich repeat 352 411 IPR001611 GO:0005515
Acco04g1382 995 ProSitePatterns Serine/Threonine protein kinases active-site signature. 788 800 IPR008271 GO:0004672|GO:0006468
Acco04g1382 995 Gene3D Ribonuclease Inhibitor 197 263 IPR032675 -
Acco04g1382 995 SMART LRR_typ_2 326 350 IPR003591 -
Acco04g1382 995 SMART LRR_typ_2 146 170 IPR003591 -
Acco04g1382 995 SMART LRR_typ_2 98 122 IPR003591 -
Acco04g1382 995 SMART LRR_typ_2 398 422 IPR003591 -
Acco04g1382 995 SMART LRR_typ_2 277 301 IPR003591 -
Acco04g1382 995 SMART LRR_typ_2 374 397 IPR003591 -
Acco04g1382 995 SMART serkin_6 665 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1382 995 FunFam Leucine-rich repeat receptor-like protein kinase TDR 274 592 - -
Acco04g1382 995 PANTHER RECEPTOR-LIKE PROTEIN 55 316 959 - -
Acco04g1382 995 Gene3D Phosphorylase Kinase; domain 1 635 740 - -
Acco04g1382 995 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Acco04g1382 995 CDD STKc_IRAK 671 960 - -
Acco04g1382 995 Gene3D Ribonuclease Inhibitor 264 598 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1382 Acco-ChrAcco04 15241658 15245347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1382 19 962 Receptor kinase-like Gene Family AT3G47570 35.192 6.58e-159 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Acco04g1382 Pkinase 4e-44 CL0016