Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1315 ATGGAAAATCCCAGGTCAGAGAAGCTAGAATTTCTGAAAAAATGGATGGAGGGTATGGGAAAATGCACGTCCCTTAAGAAGAACATGAGCTTGTTGGAGAGGGAAAAAGCCATAAAAGTGTCAGCAGATTTAGCCATGGCTTCTACCAGAACTCAAACCAATAAGTACGGTTGGAGGCGTGCCCTTATTGCCAATATTGCTTCCACGGACCACAACAGTAAGGTCCTAACGGATCACATGATAGGGTCTTCACAGTGCTTTAGGCTAAGAAAGGCTTTCACTTCTTTTTCTTCGCCGTCTCAGTTTCATAGAAGCAGGAAGATCATGAAGAGAAGGAGCCGTACAGTTCGTAGGAGAGTGATGAAGAAAACAGTTATGGCGGATTGTATTGCAAGGAGGCTGGTCCAAAAGAGAAGAGAAATGCTTAAGAGGCTTGTTCCAGGTGGCCATCTTATGGACGATGACGTGTCCTTGCTCGAAGAAACCCTAGATTATATTCAATCCCTCCGATCTCAAGTTCAAGTAATGCGCTCTCTTCTCGCTTCCTCCCAGATCACGAAATCTTCCTAA 570 0.4474 MENPRSEKLEFLKKWMEGMGKCTSLKKNMSLLEREKAIKVSADLAMASTRTQTNKYGWRRALIANIASTDHNSKVLTDHMIGSSQCFRLRKAFTSFSSPSQFHRSRKIMKRRSRTVRRRVMKKTVMADCIARRLVQKRREMLKRLVPGGHLMDDDVSLLEETLDYIQSLRSQVQVMRSLLASSQITKSS 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1315 189 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 10 180 IPR044660 GO:0006355
Acco04g1315 189 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 135 178 IPR036638 GO:0046983
Acco04g1315 189 CDD bHLH_AtIBH1_like 133 180 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1315 Acco-ChrAcco04 13849811 13850380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1315 10 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 40.571 2.99e-30 107
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g1315 04 13849811 13850380 Acco04g1315 04 13849811 13850380 ECH