Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1312 ATGGCTCTCAACATTATGAAGGCAGTGTTACTGATGGGGCTTGCCATCTTGAGCCTTGTCTCAGTGGCATCTGCTATTCCTGGAACAGCCACCTTTTACACCGTTTATGTTCCATCGGCATGCTATGGATTTCAAGATCAAGGGACAATGATAGCAGCAGCAAGCGACCCAATCTATAACAATGGAGCTGCATGTGGAAGAATGTACAGAGTTACTTGTACCAGTGGCACCAACAGTGTTCCTAATCCCTGCCGGGGAGGAAGTGTCACCGTCAAAATCGTCGATCGCTGCCCTTCTCCGGGATGCCGAGCTACCTTGGATCTCTCTCAGGAAGCTTTCTCCGCCATTGCTAACCCTGACGCAGGAATAGTCAACATTGACTACGTCCAGGTCTGA 396 0.4975 MALNIMKAVLLMGLAILSLVSVASAIPGTATFYTVYVPSACYGFQDQGTMIAAASDPIYNNGAACGRMYRVTCTSGTNSVPNPCRGGSVTVKIVDRCPSPGCRATLDLSQEAFSAIANPDAGIVNIDYVQV 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1312 131 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 28 131 IPR007112 -
Acco04g1312 131 SUPERFAMILY Barwin-like endoglucanases 15 131 IPR036908 -
Acco04g1312 131 Pfam Lytic transglycolase 52 128 IPR009009 -
Acco04g1312 131 Gene3D - 19 131 IPR036908 -
Acco04g1312 131 FunFam Barwin-related endoglucanase 25 130 - -
Acco04g1312 131 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 5 130 IPR044206 GO:0009627|GO:0048046
Acco04g1312 131 SMART dpbb_1 51 128 IPR007112 -
Acco04g1312 131 CDD DPBB_EG45-like 26 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1312 Acco-ChrAcco04 13798410 13801987 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1312 50 130 Expansin Gene Family AT2G45110 32.609 8.03e-09 50.4