Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1310 ATGGCTCTCCAAATGAAAGAAGCAGTGTTAGTAATGGGGCTTGCCCTCCTCAGCCTTGTCTCAGTGACATCTGCTTCTTCTGGCACTGCCACCTTCTACACTCAATACGTTCCATCTGCATGCTATGGTAATAAAGAAGAAGGAACAATGATAGCAGCAGCAAGCGACGCACTGTGGGATAACGGAGCTGTGTGTGGAAGACATTACAAAGTTACGTACAACGGAAAAAGTATCACCGTCAAGATTGTGGATCGCTGCCCTTCTTCCTCATGCAACGCCACCTTGGATCTCTCCGAGCAAGCCTTCTCCGCCATCGCCGACCCTGTTCTTGGCAAAATCAACATTGACTACTCCCAGTTATTCACATTCTCTCCCTTCTTTTTCAATTTCCATTACACACTTGATATATAG 411 0.4647 MALQMKEAVLVMGLALLSLVSVTSASSGTATFYTQYVPSACYGNKEEGTMIAAASDALWDNGAVCGRHYKVTYNGKSITVKIVDRCPSSSCNATLDLSEQAFSAIADPVLGKINIDYSQLFTFSPFFFNFHYTLDI 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1310 136 SUPERFAMILY Barwin-like endoglucanases 15 119 IPR036908 -
Acco04g1310 136 CDD DPBB_EG45-like 27 118 - -
Acco04g1310 136 Gene3D - 25 120 IPR036908 -
Acco04g1310 136 Pfam Lytic transglycolase 28 117 IPR009009 -
Acco04g1310 136 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 28 120 IPR007112 -
Acco04g1310 136 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 5 119 IPR044206 GO:0009627|GO:0048046
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1310 Acco-ChrAcco04 13785140 13786245 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1310 50 108 Expansin Gene Family AT2G45110 36.765 5.99e-07 45.1