Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1308 ATGAAAGCAGTCTTAGTAATGGGGATCGCCATCCTCAGCCTTGTCTCTGTGGCTTCTGCTGATGCTGGAACTGCCACCTTTTACACTGTTTATGTTCCATCAGCATGCTATGGATATCAAGATCAAGGCACAATGATAGCAGCAGCAAGCGACCCAATCTATAACAATGGAGCTGCATGTGGAACAACGTACAGAGTTACTTGTACCAGTGGCACCAACAGTGTTCCTAATCCCTGCCGGGGAGGAAGTGTCACCGTCAAAATCGTGGATCGCTGCCCTTCTCCGGGATGCCGAGGTACCTTGGATCTCTCTCAGGAAGCTTTCTCCGCCATTGCTAACCCTGACGCAGGAGTAGTCAACATTGACTATGTCCAGGTCTGA 381 0.4987 MKAVLVMGIAILSLVSVASADAGTATFYTVYVPSACYGYQDQGTMIAAASDPIYNNGAACGTTYRVTCTSGTNSVPNPCRGGSVTVKIVDRCPSPGCRGTLDLSQEAFSAIANPDAGVVNIDYVQV 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1308 126 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 23 126 IPR007112 -
Acco04g1308 126 SUPERFAMILY Barwin-like endoglucanases 11 126 IPR036908 -
Acco04g1308 126 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 2 125 IPR044206 GO:0009627|GO:0048046
Acco04g1308 126 CDD DPBB_EG45-like 21 124 - -
Acco04g1308 126 Gene3D - 13 126 IPR036908 -
Acco04g1308 126 SMART dpbb_1 46 123 IPR007112 -
Acco04g1308 126 Pfam Lytic transglycolase 47 123 IPR009009 -
Acco04g1308 126 FunFam Barwin-related endoglucanase 20 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1308 Acco-ChrAcco04 13768610 13769449 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1308 45 125 Expansin Gene Family AT2G45110 34.783 1.72e-09 52.0