Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1307 ATGGCTCTCAACATTATGAAAGCAGTCTTAGTAATGGGGATCGCCATCCTCAGCCTTGTCTCTGTGGCTTCTGCTGATGCTGGAACTGCCTCCTTTTACACTGTTTATGTTCCATCAGCATGCTATGGAAATCAAGATCAAGGGACGATGATAGCAGCAGCAAGCGACCCAATCTATAACAATGGAGCTGCATGTGGAAGAATGTACAGAGTTACCTGCACCAGTGGCACCAACAGTGTTCCTAATGCCTGCCGGGGAGGAAGCGTCACCGTCAAGGTGGTTGACCGCTGCCCTTCTCCGGGATGCCGAGCTACCTTGGATCTCTCTCAGGAAGCTTTCTCCGCCATTGCTAACCCTGACGCAGGAGTAGTCAACATTGACTACGTCCAGGTCTGA 396 0.5101 MALNIMKAVLVMGIAILSLVSVASADAGTASFYTVYVPSACYGNQDQGTMIAAASDPIYNNGAACGRMYRVTCTSGTNSVPNACRGGSVTVKVVDRCPSPGCRATLDLSQEAFSAIANPDAGVVNIDYVQV 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1307 131 Pfam Lytic transglycolase 52 128 IPR009009 -
Acco04g1307 131 Gene3D - 18 131 IPR036908 -
Acco04g1307 131 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 27 131 IPR007112 -
Acco04g1307 131 SUPERFAMILY Barwin-like endoglucanases 16 131 IPR036908 -
Acco04g1307 131 SMART dpbb_1 51 128 IPR007112 -
Acco04g1307 131 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 5 130 IPR044206 GO:0009627|GO:0048046
Acco04g1307 131 CDD DPBB_EG45-like 26 129 - -
Acco04g1307 131 FunFam Barwin-related endoglucanase 25 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1307 Acco-ChrAcco04 13752481 13753321 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1307 6 131 Expansin Gene Family AT2G40610 32.450 2.80e-10 54.3