Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1306 ATGAAAGCAGTCTTAGTAATGGGGCTTGCCATCCTCAGCCTTGTCTCTATGGCTTCTTCTGTTCCTGGAACTGCCTCCTTTTACACTGTTTATGTTCCATCGGCGTGCTATGGATTTTTAGATCACGGGACAATGATAGCAGCAGCAAGCGACCCAATCTTTAACAATGGAGCTGCATGTGGAAGAATGTACAGAGTTACTTGCACAAGTGACACCAACAGTTTTCCTAATGCCTGTCGGGGAGGAAGCGTCACCGTCAAGGTCGTCGACCGTTGCCCTTCTCCGGGATGCCGAGCTACCTTGGATCTCTCTCAGGAAGCTTTCTCCATCATTGCTAACCCGGACGCAGGAAGAGTTAATATAGAATATGATAGTGTAGATAATAATGGCACCATCTATATATCATCAAATAATAATCTTATTTGTGTTTCAAATTCCATGTAA 444 0.4437 MKAVLVMGLAILSLVSMASSVPGTASFYTVYVPSACYGFLDHGTMIAAASDPIFNNGAACGRMYRVTCTSDTNSFPNACRGGSVTVKVVDRCPSPGCRATLDLSQEAFSIIANPDAGRVNIEYDSVDNNGTIYISSNNNLICVSNSM 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1306 147 CDD DPBB_EG45-like 22 123 - -
Acco04g1306 147 Gene3D - 15 127 IPR036908 -
Acco04g1306 147 FunFam Barwin-related endoglucanase 20 125 - -
Acco04g1306 147 SUPERFAMILY Barwin-like endoglucanases 10 135 IPR036908 -
Acco04g1306 147 SMART dpbb_1 46 123 IPR007112 -
Acco04g1306 147 Pfam Lytic transglycolase 47 123 IPR009009 -
Acco04g1306 147 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 2 124 IPR044206 GO:0009627|GO:0048046
Acco04g1306 147 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 23 126 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1306 Acco-ChrAcco04 13742864 13743644 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1306 42 145 Expansin Gene Family AT5G56320 31.148 5.28e-09 51.6