Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1299 ATGCTTTCGAAATCTTGCTTAGACCTTTTGAGTCTGGTCTCCGTCGATGATTACCGGGCACTGTATCAGATCCCAAGAGTCCCGACGGTGCCGGGAGTTGTATCGAAATTCGACGCCGCCGCAGATGACGACCATGCCGATTCTGCCTCCGGATCCGACGACTCCCTTTCGTCTGGGACGCCTGAGCGAAGGATCATAGTCGCAAACCAATTGCCGATACGGGCGTTTCGGGACGAGGACACCAAGAAATGGAGTTTCGAATACGACAGTGATAGTTTGGTGCTGCAGCTCAAAGACGGGTTTCCCTCCGACGTCGACGTTCTGTACGTCGGGTCGTTGAAGGAGGAGATCGACCTGTCGGAACAAGACGAAGTGGCGCAAGTTTTGCTGGAAAAGTTTCGGTGTGTACCTACCTTCTTGCCTTCTGAAATTCACTATAAGTACTACCATGGCTTCTGCAAGCATTACCTTTGGCCTCTGTTTCATTACATGGTACCTATGTCGACGAGCCAAGGCTCTCGCTTCGATCGCTCGCAGTGGCAAGCTTATGTTTTGGCCAACAGAATCTTCGCGAACAAGGTAACAGAGGTGATCAACCCTGACGAGGATTACGTTTGGGTCCATGATTACCATCTAATGATCTTGCCTACAATACTGAGGAAACGGTTCCACCGGGTTAAGCTGGGATTCTTTATGCATAACACATTTCCGTCTTCGGAAATTTATAGAACTTTACCCGTTCGCGATGACCTCCTTCGGTCCTTGTTGAATTGTGATTTGATTGGATTTCACACATTTGATTACGCGAGGCATTTCTTATCCTGTTGCAGCAGGATGTTCGGTCTGGATTATGAGTCTAAGAGGGGTTACATAGGACTGGATTATTACGGTCGAACCGTGATGATTAAGATCCTGGCGGCCGGAATCCACATGGGTCAGCTTGAATCGTTGTTTTCGCAGTCCGAGACAGCTGAGAAGATGAAGGAACTGAAGAAACGATATGAGGGGAAATTTGTGATTTTGGGTATAGATGACATGGATTTGTTCAAAGGTATCAACTTGAAGTTCTCAGCAATGGGGCAACTCTTGGATATGCAGGAGGAATTAAGGGGTCGAGTGGTTTTAGTTCAGATTCTGAACCCTGCAAGGAGCGAAGGTAAAGACATTCAAGATATTCAAAACGAGACCAATGCGATCGCCAAGGAAGTCAATGAGAAATACGGCGGACCAGGTTACCAGCCAATTACCATAATCAACGGCCCAGTTTCAACACTTGAGAAGGCTGCTTATTGTGCCATTTCTGACTGCTGTGTTGTAAATGCTGTGAGAGATGGCATGAACTTGGTGCCTTATATGTACACTGTTTGCAGACAGGGCAGCTCTGTGTTGGACAAAGCCCTTGAAGAAGAAGGAGAAGATGGCAATGACTCAAAAAGGCCTAAGCAGAGTGTCATCATAGTCTCTGAGTTCATAGGATGCTCGCCATCACTGAGTGGTGCTATCCGAGTGAACCCATGGAACATCGAAGAGGTCTCTGACGCCATGAATCTAGCAGCCACAATGCCAGAGGCAGAGAAGCATTTGCGGCACGAGAAACATTATAAGTACATAAGTTCTCACGATGTCACTTATTGGGCTCGGAGTTTCGATCAGGACTTGGAGAGAGCATGCAGGGATCATTACCTCAAGAGATATTGGGGTGTTGGCCTAGGCTTGGGGTTCAGAATTGTGGCTTTGGATCCTACATTTAGGAAGCTTTCAGTGGATAACATTGCATCTGCTTATAGAAACACACAATGCCGTTTGATCCTTCTGGATTATGATGGTACTATGTTACCACAGTCATCTATGGACAAAACTCCGACCAAGGAGGTTATCTCAATCTTGAATTCTCTGTGTAGTGATCCCAAGAACATTGTGTTCATTGTGAGTGGAAGAGATAAGAAGTGCCTAAGCAAGTGGTTTTCTCCATGTGAGAAGCTTGGTCTCTCTGCCGAGCATGGTTACTTCACCAGGTGGAATAGTGATTCTTCATGGGAGAGTTGTGGATTGACGATGGACTTTGATTGGAAGAAGGTTGCAGAACCCGTAATGGCGCTTTACACAGAAGCAACTGATGGCTCTTTCATTGAACATAAGGAAAGTGCACTGGTTTGGCATCACCAAGAAGCTGACCCTCACTTTGGATCATCCCAAGCCAAAGAGCTTCTCGATCACCTCGAGAGCGTTCTTGCCAATGAGCCAGTCATCGTCAAAAGAGGACAACACATTGTCGAAGTAAACCCTCAGGGTGTGAGCAAAGGCATAGCAGTGGAAAGCCTGATATCGAGCGTGAGGAAAGCAGGGAAGTCTGTGGATTTTCTGCTGTGTATCGGAGATGATCGCTCAGATGAAGACATGTTTGAGAGCATTAGTTGCACAGTCGCTAATTCAAACCTACCAGCCATAGGACAAGTGTTTGCATGCACAGTTGGTCAGAAACCAAGCATGGCCGAGTATTACTTGGATGACACTTGTGAAGTTATCGGGTTGCTCAAAGGACTTGCTAATGCTTCTTCTGTTTCAGTAGTGTCACCACCTTCAATGTCTCTATATTCTCTGGAGGATGATTCATTAGAATCTCTTTAG 2628 0.4658 MLSKSCLDLLSLVSVDDYRALYQIPRVPTVPGVVSKFDAAADDDHADSASGSDDSLSSGTPERRIIVANQLPIRAFRDEDTKKWSFEYDSDSLVLQLKDGFPSDVDVLYVGSLKEEIDLSEQDEVAQVLLEKFRCVPTFLPSEIHYKYYHGFCKHYLWPLFHYMVPMSTSQGSRFDRSQWQAYVLANRIFANKVTEVINPDEDYVWVHDYHLMILPTILRKRFHRVKLGFFMHNTFPSSEIYRTLPVRDDLLRSLLNCDLIGFHTFDYARHFLSCCSRMFGLDYESKRGYIGLDYYGRTVMIKILAAGIHMGQLESLFSQSETAEKMKELKKRYEGKFVILGIDDMDLFKGINLKFSAMGQLLDMQEELRGRVVLVQILNPARSEGKDIQDIQNETNAIAKEVNEKYGGPGYQPITIINGPVSTLEKAAYCAISDCCVVNAVRDGMNLVPYMYTVCRQGSSVLDKALEEEGEDGNDSKRPKQSVIIVSEFIGCSPSLSGAIRVNPWNIEEVSDAMNLAATMPEAEKHLRHEKHYKYISSHDVTYWARSFDQDLERACRDHYLKRYWGVGLGLGFRIVALDPTFRKLSVDNIASAYRNTQCRLILLDYDGTMLPQSSMDKTPTKEVISILNSLCSDPKNIVFIVSGRDKKCLSKWFSPCEKLGLSAEHGYFTRWNSDSSWESCGLTMDFDWKKVAEPVMALYTEATDGSFIEHKESALVWHHQEADPHFGSSQAKELLDHLESVLANEPVIVKRGQHIVEVNPQGVSKGIAVESLISSVRKAGKSVDFLLCIGDDRSDEDMFESISCTVANSNLPAIGQVFACTVGQKPSMAEYYLDDTCEVIGLLKGLANASSVSVVSPPSMSLYSLEDDSLESL 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1299 875 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 600 717 - -
Acco04g1299 875 Pfam Trehalose-phosphatase 604 837 IPR003337 GO:0003824|GO:0005992
Acco04g1299 875 Gene3D Glycogen Phosphorylase B; 57 316 - -
Acco04g1299 875 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 26 850 IPR001830 GO:0003824|GO:0005992
Acco04g1299 875 CDD GT20_TPS 63 554 IPR001830 GO:0003824|GO:0005992
Acco04g1299 875 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 56 315 - -
Acco04g1299 875 Gene3D Glycogen Phosphorylase B; 317 538 - -
Acco04g1299 875 FunFam Trehalose-6-phosphate synthase 2 684 763 - -
Acco04g1299 875 NCBIfam trehalose-phosphatase 601 848 IPR003337 GO:0003824|GO:0005992
Acco04g1299 875 SUPERFAMILY HAD-like 601 849 IPR036412 -
Acco04g1299 875 Gene3D - 729 857 IPR023214 -
Acco04g1299 875 Gene3D - 600 717 IPR023214 -
Acco04g1299 875 NCBIfam HAD-IIB family hydrolase 602 808 IPR006379 -
Acco04g1299 875 CDD HAD_TPP 602 838 - -
Acco04g1299 875 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 730 859 - -
Acco04g1299 875 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 558 - -
Acco04g1299 875 FunFam Alpha,alpha-trehalose-phosphate synthase 317 538 - -
Acco04g1299 875 Pfam Glycosyltransferase family 20 63 554 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1299 Acco-ChrAcco04 13548625 13551451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1299 1 855 Trehalose Biosynthesis Gene Families AT2G18700 65.541 0.0 1168