Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1279 ATGGGATTTGCAGACAGTGTTGGAAAATATAGACTTGGTCGGACGATTGGCGAAGGGACATTCGCTAAGGTTAAGCTTGGTGTTAACAGCATCAATGGTCAACATGTGGCAATCAAGATCCTTGATAAGAATATGGTCATGGAGAGCCATCTCAAGTATCAGGTCCAAAGAGAGATAAGAACGATGAAGCTCCTGAATCATCCCAATATTGTAAAAATCCATGAGGTTCTTGGCACGAAGACGAAGATATATATTGTGATGGAGTATGTATCAGGAGGACAATTATCAGACAAGCTGTCTTATGCCATAAAGTTGAATGAAAATGAAGCAAGGAAACTTTTCCAGCAACTTATTGATGCTGTAGATTACTGCCATAACAAAGGAGTTTACCATAGAGATCTTAAGCCAGCAAACTTGCTTCTCGACAGCAAAGGGAATCTGAAGCTGTCTGATTTCGGACTAAGCGCACTGAGAAGAAAGCCTGATAATGTTCTAACAACTGCATGTGGTTCCCCAAGCTATGTGGCACCTGAGCTTCTATGGAACAAGGGCTATGATGGAGCAGCTGCTGATGTTTGGTCATGTGGGGTGATCCTTTTTGAATTACTTGCAGGTCATCTTCCTTTTGATGACCCCAACTTGATGAACTTGTATAAGAAGATATGTAGAGCAGAGTACATGTGCCCACCATGGTTTACAGCAAGTCAAAGGAAAGTAATTGCCAAAATACTCGAACCACAAGTTACAAAGAGAATAACTATGCCAGAGATCATGGAAGATGAATGGTTTCAAACAGATTATGTTCCTGCTTGTGAATCTGAGTGTGATCAGAACATTTACGTTGATGATGTTAATGCTGCTTTTGATTTAGTCGAGGAGAATATCTTAGAGGCAACAATCCCCAAGTCCTCAAGTTTCATTAATGCTTTCCAACTTATAGCCATGTCTGAAGACCTTGATCTATCAGGTCTTTTTGAAGAACAGGATCATAAGCAGAAAACAAGAATAGGATCTAAGCACAACATTGATGAAACCATAGAGAAAATAGAAACTGCAGCAACAGATGTGAAGCTGTCAATAGAAAAAAAGAACAACTTCACGTTAAAAATGCAACCCAAACGAACCATGACTAGATGTTCCAGATCACATTATGACCTATCAGCTAAGGTGATTGAAGTTGCTCCAGCTCATTGTGTTGTTGAAATATCAAAATCTGCAGGAGATTTAATAATCTACAATGAATTTTGTCGAAGTCTATCCAATCTACTGATAGAAAAATCTGTTGAATTATCGCAATCCCATGAGTCTATCGAAGAATGCGTCACTGAAAAGAATAACCAAGATGCTGGCCCCTCTGAAGAGTCGAACCAGGAAGATAATAAAGGCATTCATGATCATATATCTGCTTGA 1410 0.3943 MGFADSVGKYRLGRTIGEGTFAKVKLGVNSINGQHVAIKILDKNMVMESHLKYQVQREIRTMKLLNHPNIVKIHEVLGTKTKIYIVMEYVSGGQLSDKLSYAIKLNENEARKLFQQLIDAVDYCHNKGVYHRDLKPANLLLDSKGNLKLSDFGLSALRRKPDNVLTTACGSPSYVAPELLWNKGYDGAAADVWSCGVILFELLAGHLPFDDPNLMNLYKKICRAEYMCPPWFTASQRKVIAKILEPQVTKRITMPEIMEDEWFQTDYVPACESECDQNIYVDDVNAAFDLVEENILEATIPKSSSFINAFQLIAMSEDLDLSGLFEEQDHKQKTRIGSKHNIDETIEKIETAATDVKLSIEKKNNFTLKMQPKRTMTRCSRSHYDLSAKVIEVAPAHCVVEISKSAGDLIIYNEFCRSLSNLLIEKSVELSQSHESIEECVTEKNNQDAGPSEESNQEDNKGIHDHISA 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1279 469 FunFam Non-specific serine/threonine protein kinase 302 427 - -
Acco04g1279 469 Gene3D Transferase(Phosphotransferase) domain 1 95 287 - -
Acco04g1279 469 SUPERFAMILY Protein kinase-like (PK-like) 7 307 IPR011009 -
Acco04g1279 469 Pfam Protein kinase domain 10 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1279 469 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 408 - -
Acco04g1279 469 Gene3D Phosphorylase Kinase; domain 1 4 94 - -
Acco04g1279 469 CDD CIPK_C 308 420 - -
Acco04g1279 469 ProSiteProfiles Protein kinase domain profile. 10 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1279 469 FunFam Non-specific serine/threonine protein kinase 4 303 - -
Acco04g1279 469 MobiDBLite consensus disorder prediction 436 469 - -
Acco04g1279 469 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Acco04g1279 469 FunFam Non-specific serine/threonine protein kinase 2 89 - -
Acco04g1279 469 MobiDBLite consensus disorder prediction 454 469 - -
Acco04g1279 469 Pfam NAF domain 305 362 IPR004041 GO:0007165
Acco04g1279 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Acco04g1279 469 Gene3D Kinase associated domain 1, KA1 302 425 - -
Acco04g1279 469 ProSiteProfiles NAF domain profile. 302 326 IPR018451 GO:0007165
Acco04g1279 469 SMART serkin_6 10 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1279 Acco-ChrAcco04 13123332 13126401 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1279 7 419 CBL-interacting serine-threonine protein kinases AT1G01140 50.120 8.42e-151 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Acco04g1279 Pkinase 1e-70 CL0016