Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1258 ATGAGAGAGTTCTGGACCTCTTTGGCGTCGATTCTTGGCGTTTTTGCTTTCTGTCAGACTCTTCTCCAGACGGTTTTCCCGCCGGAGCTCCGGTTCGCCACCGTTAAGTTCTTTAACCGCCTGTTTAACTGCTTTTCATCGTACTGCTACTTCGATATAACGGAAATCGACGGCGTTAATACCAACGAGCTCTACAACGCCGTCCAGCTCTACCTCAGCTCCTCCGTCTCCATCACCGGAAACCGCCTCAGCCTCACCCGCGCTCTCAACTCCAGCGGCTTCACCTTCGGCCTCGCCAACAATGACAGCATCATCGACACCTTCAACGGCGTCAATGTGCTGTGGGAACATGTGGTCACGCAGAGGCAGGCCCAGAACTTCTCGTGGCGGCCGCTGCCGGATGAGAAGCGAGGGTTCACGCTCCGAATCATGAAGAAAGATAAATCATTGATTCTCGATTCCTACTTGGTTTACATTATGGAGAAAGCGAATGAGATTAGGAGGAAGAATCAGGACCGTTTATTGTACACGAATTCCAAAGGCGGTTCTTTGGACTCTAGGGGTCACCCTTGGGAATCGGTGCCGTTCAAGCATCCTAGCACGTTCGATACTTTAGCGATGGACCGTGAGAGGAAGAAGGAGATCATGGAAGACCTGCAAGATTTCGCTAACGGCCAATCGTTCTACCAGAAAACGGGTCGGGCATGGAAGAGAGGTTATCTTCTGTACGGACCACCCGGAACCGGAAAATCCAGTATGATCGCTGCAATGGCGAATTATCTCGGGTATGATATATACGACTTGGAATTGACGGAGGTTCATAACAATTCAGAGTTGAGGAAGCTTCTGATGAAGACGAGCTCTAAATCCATCATTGTGATCGAAGACATTGATTGCTCAATTAACTTGACCAACAGGAAGAAGAACGGTAACAATACTAGTTCGAGGAACTACTACGATCCTGCCGCGGAGTTACGAGGTGCTTGTGGTGGCTCTGCTTGTGGTGAAGAGGGTGGGAATTCAATAACGCTTTCTGGGTTGTTGAATTTCACTGATGGGTTATGGTCCTGCTGTGGGAGCGAGAGGATTTTTGTGTTCACAACCAACCACATTGAGAAACTGGACCCTGCTCTGTTACGAAGTGGGAGAATGGATATGCACATTTTCATGAGCTACTGTTCATTCTCGGCTCTGAAGATCCTTCTGAAGACTTATCTGGCATATGAAGAAGGTGATTTGGAGGTGTCAGTGATGAAGGAATTGGAGCAAGTTATCGACAAGGCACGGATGACTCCGGCGGATATCAGCGAGGTTCTGATCAAGAGCCGGCGGTTCAAGGAGAAAGCAGTGAAAGAGTTGTTGGAGACACTGAAACTGGCAGCAGAAAGGAACCAAAAAAATGGGGTTCTGAGAAGAACAAATGGTGGGGTGGATGTGGAAGAAGAAGAGCAAGAGAAAAGAGCTCTAGAGAGTCCTAAAGAAGAGTCAGAGATAGAGGACAGTTGCAGCAAGGGAGGTGAAGAAGGTGAAGAGGAAGAAGAAGAGAAGATCAAATAA 1557 0.4849 MREFWTSLASILGVFAFCQTLLQTVFPPELRFATVKFFNRLFNCFSSYCYFDITEIDGVNTNELYNAVQLYLSSSVSITGNRLSLTRALNSSGFTFGLANNDSIIDTFNGVNVLWEHVVTQRQAQNFSWRPLPDEKRGFTLRIMKKDKSLILDSYLVYIMEKANEIRRKNQDRLLYTNSKGGSLDSRGHPWESVPFKHPSTFDTLAMDRERKKEIMEDLQDFANGQSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIEDIDCSINLTNRKKNGNNTSSRNYYDPAAELRGACGGSACGEEGGNSITLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSFSALKILLKTYLAYEEGDLEVSVMKELEQVIDKARMTPADISEVLIKSRRFKEKAVKELLETLKLAAERNQKNGVLRRTNGGVDVEEEEQEKRALESPKEESEIEDSCSKGGEEGEEEEEEKIK 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1258 518 MobiDBLite consensus disorder prediction 504 518 - -
Acco04g1258 518 Coils Coil 479 499 - -
Acco04g1258 518 Pfam Domain associated at C-terminal with AAA 26 118 IPR025753 -
Acco04g1258 518 Pfam ATPase family associated with various cellular activities (AAA) 241 391 IPR003959 GO:0005524|GO:0016887
Acco04g1258 518 Gene3D - 192 392 IPR027417 -
Acco04g1258 518 PANTHER BCS1 AAA-TYPE ATPASE 7 463 - -
Acco04g1258 518 MobiDBLite consensus disorder prediction 470 518 - -
Acco04g1258 518 CDD RecA-like_BCS1 215 390 - -
Acco04g1258 518 MobiDBLite consensus disorder prediction 475 503 - -
Acco04g1258 518 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 130 457 IPR027417 -
Acco04g1258 518 SMART AAA_5 236 394 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1258 Acco-ChrAcco04 12799732 12801288 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1258 210 459 Calmodulin-binding Proteins AT3G56690 24.031 2.37e-09 58.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g1258 04 12799732 12801288 Acco04g1258 04 12799732 12801288 ECH