Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1237 ATGGCTAGAAAGGAGGAACTTAAAAACGAAAAGAAGCCTGTGGAGCCCAGGAATTTGCAACCCCCATTAATTTGCATATTCCATATACTACTATCACTTTCTTCAATGATCAGGAATATACAGAGAGCAAATATGGCTAAAGGTTTGAAGAAAAGCAACTTTGAAGTGCTGGGAATATGTTGTAATTCAGAGGTTGCTCTGATTGAAAAGATTCTGAAGGGTCTTCATGGAGTAAAGGAGATTTCAGTCATGCTCCCGACCCGAACCGCCACCGTAATCCATGATCTTGATCTAATCTCTGAGTCACAAATCACTGATGCACTGAACATGGCAAGGCTTGAAGCTAGTTTGAAACCTGAAGGAGAGACTAAGCATGAAACGAAATGGCCAGCTCCAAGTACTTTGGCTTGTGGCTTGTTACTTGCACTTTCTTTTTTGAAGTATGTTTATCAACCTTTGGAATACTTTGCTATTGGTGCTGTTGTTATTGGCTCCCCTATAATTCTATTAAGAGGCATAGCTTCGATCAGGAATCTCTCTCTTAATATCAACATTCTAGTTCTATTGTCAGTGTTTGGTACTCTTGCTTTGGGAGATTTCTGGGAAGCTGGAATCATCACCTTCCTATTCTCCATTGCTCAATGGCTAGAGACAGTAGCCAGTTACAAGGCTATAGCCACCATGTTCTCTTTAACAAACATGGCTCCTCAAAGGGCCATTATTGCTGAGACAGGGGAACAAGTTGACGTCAATGAAGTTAAGATAAACACTGTCCTTGCAGTCAAGGCAGGTAATGCTATTCCTCTTGATGGTATTGTCGTCGAAGGGAAATGTGAAGTCGACGAAAAAATGTTGACAGGAGAGTCACTCCCTGTCACCAAAGAGTTAGGTTCAACTGTTTGGGCTGGCACTATTAATCTAAATGGTTATATCAGTGTGAAAACAACTGCATTGGCAACAGACACAGCAGTGGCAAGAATGACAAAGCTTGTTCAAGAGGCTCATGGCAGAAAATCTAGAGCTGAAAGATTCATAGATACCTGTGCTAAGTACTATGTACCTGGGGTTTTCTTGATATCAGTTGGTGTTGCTGTGATTCCCATAGCATTAAGAGTTCCCAACATTAAGTATTGGGTTCACATGGCTATTGTGGTTTTAGTAAGTGCATGCCCTTGTGCTCTTGTCCTCTCCACACCAGTTGCAATCTTCTGTTCCCTCACAAAAGCTGCCACAAGTGGGTTACTTCTTAAAGGTGGAGATTATGTAGAAGCACTTGCTAGGATTAAGATTCTGGCCTTTGATAAGACAGGCACATTGACAAAAGGGCAGTTCACAGTCACAGATTTTTCTACTGTTGGAGATGATATTAGCATTCAACTGTTACTTTACTGGGTTACTAGTATTGAGAGTAAATCAAGTCACCCTATGGCAGCTGCACTTTTGGAATATGGAACGATACATGGTATCAAACCAATCCCTGGAAATGTGGAGGATTTTCAGAATTTTCCAGGCGAAGGAGTTTCCGGAAAAATCGATGGGAAAGAAGTCTACATTGGCAACAGGAAAATATGTGTGAGAGCTGGCTGTGAAAGTGAGTTTCTAACTAAGGAAAAAAGAAATGGTTATATATGCTGTGGACCAACACTGGTTGGATTGTTCAGCCTATCAGATACATGCAGATCCGGAGCTTTAGAGGCAATCGAAGAGCTTCAGTCATTAGGCGTGAAATCGGCAATGCTGACAGGAGATAGCACTCATGCTGCTACACTTGTTCAGACTCAGCTGAATCATGCTCTAGACATAGTTCATGCTGAGCTTCTACCACACGAGAAGGCAGTGATCATAGAGAATTTTAAGAAAGATGGGCTTACAGCCATGATTGGAGATGGTATAAACGACGCTCCAGCATTAGCCACAGCTGATGTGGGCATCTCTATGGGAATCTCAGGTTCAGCTCTCGCAGTAGAAACAGGCCACATCATTCTCATGTCAAACGACCTCAGGAAGATACCTGAAGCCATTCATCTTGCAAGAACAACTTCCAGAAGGCTAGTTCAAAATGTCGTTTTCTCCATTGTCACAAAGGCTTTGGTCCTAGCTTTGGCTCTAGCAGGATACCCACTAGTTTGGCTCGCCGTTTTGGCTGATGTTGGAACCTCCTTGCTTGTGATTCTCAACAGCATGTTACTTCTGAACGAGAAAAAACACAATAACAACAACAGAAAAGTACTTAATAAACCCAAATATGGGTTGCTCATAGAGGATAATAATAAGAACGAGCTATTACTTGGAAAGCAAACTGATTGTGGTGAAGAATTCTGCAGCAATGTCTCTTGTGAAGTGACCATTCCTAGTACTGCAACAACTGAATGCAAAAATGCCAGCTGTTCAAATTCTGGGCTTTTGAATATGAGCTTGCTGGAGGAGTCTTCATGCAGAAAGAAGAGTACCTGTAACTCTGATTGTTGCAAGGTTCAGAACAGAGAATTGAAGGTTAGTACAGAGAAGTGTGGGAATCAACAATGCTGCAAAGAATCCAGGAAGAAATGCTGCGATGATCAAGTAAACATACCAGAAATTGTTATTGAGTGA 2592 0.4182 MARKEELKNEKKPVEPRNLQPPLICIFHILLSLSSMIRNIQRANMAKGLKKSNFEVLGICCNSEVALIEKILKGLHGVKEISVMLPTRTATVIHDLDLISESQITDALNMARLEASLKPEGETKHETKWPAPSTLACGLLLALSFLKYVYQPLEYFAIGAVVIGSPIILLRGIASIRNLSLNINILVLLSVFGTLALGDFWEAGIITFLFSIAQWLETVASYKAIATMFSLTNMAPQRAIIAETGEQVDVNEVKINTVLAVKAGNAIPLDGIVVEGKCEVDEKMLTGESLPVTKELGSTVWAGTINLNGYISVKTTALATDTAVARMTKLVQEAHGRKSRAERFIDTCAKYYVPGVFLISVGVAVIPIALRVPNIKYWVHMAIVVLVSACPCALVLSTPVAIFCSLTKAATSGLLLKGGDYVEALARIKILAFDKTGTLTKGQFTVTDFSTVGDDISIQLLLYWVTSIESKSSHPMAAALLEYGTIHGIKPIPGNVEDFQNFPGEGVSGKIDGKEVYIGNRKICVRAGCESEFLTKEKRNGYICCGPTLVGLFSLSDTCRSGALEAIEELQSLGVKSAMLTGDSTHAATLVQTQLNHALDIVHAELLPHEKAVIIENFKKDGLTAMIGDGINDAPALATADVGISMGISGSALAVETGHIILMSNDLRKIPEAIHLARTTSRRLVQNVVFSIVTKALVLALALAGYPLVWLAVLADVGTSLLVILNSMLLLNEKKHNNNNRKVLNKPKYGLLIEDNNKNELLLGKQTDCGEEFCSNVSCEVTIPSTATTECKNASCSNSGLLNMSLLEESSCRKKSTCNSDCCKVQNRELKVSTEKCGNQQCCKESRKKCCDDQVNIPEIVIE 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1237 863 ProSiteProfiles Heavy-metal-associated domain profile. 50 116 IPR006121 GO:0046872
Acco04g1237 863 SUPERFAMILY HAD-like 431 728 IPR036412 -
Acco04g1237 863 NCBIfam heavy metal translocating P-type ATPase 183 730 IPR027256 GO:0006812|GO:0016020|GO:0019829
Acco04g1237 863 ProSitePatterns E1-E2 ATPases phosphorylation site. 434 440 IPR018303 -
Acco04g1237 863 Gene3D - 221 335 - -
Acco04g1237 863 SUPERFAMILY Calcium ATPase, transduction domain A 245 331 IPR008250 -
Acco04g1237 863 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 46 734 - -
Acco04g1237 863 FunFam Putative cadmium/zinc-transporting ATPase 3 46 118 - -
Acco04g1237 863 PRINTS P-type cation-transporting ATPase superfamily signature 281 295 - -
Acco04g1237 863 PRINTS P-type cation-transporting ATPase superfamily signature 551 562 - -
Acco04g1237 863 PRINTS P-type cation-transporting ATPase superfamily signature 573 583 - -
Acco04g1237 863 PRINTS P-type cation-transporting ATPase superfamily signature 627 646 - -
Acco04g1237 863 PRINTS P-type cation-transporting ATPase superfamily signature 651 663 - -
Acco04g1237 863 PRINTS P-type cation-transporting ATPase superfamily signature 432 446 - -
Acco04g1237 863 PRINTS H+-transporting ATPase (proton pump) signature 659 684 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco04g1237 863 PRINTS H+-transporting ATPase (proton pump) signature 627 643 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco04g1237 863 SUPERFAMILY Calcium ATPase, transmembrane domain M 184 712 IPR023298 -
Acco04g1237 863 Gene3D - 443 559 IPR023299 GO:0000166
Acco04g1237 863 CDD P-type_ATPase_HM 133 729 - -
Acco04g1237 863 SFLD p-type atpase 415 679 IPR044492 -
Acco04g1237 863 NCBIfam HAD-IC family P-type ATPase 206 707 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco04g1237 863 Gene3D - 423 678 IPR023214 -
Acco04g1237 863 NCBIfam cadmium family heavy metal-translocating P-type ATPase 183 731 - -
Acco04g1237 863 FunFam Copper-transporting ATPase 1, putative 221 335 - -
Acco04g1237 863 FunFam Putative cadmium/zinc-transporting ATPase 3 443 559 - -
Acco04g1237 863 Gene3D - 46 118 - -
Acco04g1237 863 SFLD Haloacid Dehalogenase 415 679 - -
Acco04g1237 863 Pfam haloacid dehalogenase-like hydrolase 428 641 - -
Acco04g1237 863 CDD HMA 54 116 IPR006121 GO:0046872
Acco04g1237 863 ProSitePatterns Hypothetical cof family signature 2. 627 649 - -
Acco04g1237 863 Pfam E1-E2 ATPase 242 410 - -
Acco04g1237 863 SUPERFAMILY HMA, heavy metal-associated domain 47 119 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1237 Acco-ChrAcco04 12514313 12520540 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1237 46 859 Primary Pumps ATPases AT4G30110 53.333 0.0 869