LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco04g1216	ATGATTAATATAGAAGAAAAGAAAATGAATATGCCAATAGTAACAATCAAAGGCTGCTCCACCGTAAGGCCTTGTGAAGAAACGTGGACTGGAACAATGGCCTTATCTGAATGGGATCAAACAAGCTGCTTGACTCACGTTTCTGCCATCTTCTTCTACCGACCACCAAACACTGGGCTTTCGGTGCCGTCTGCCATTGTTGACACCTTGAAACTCTCTTTAAGCAGAGCCTTGGTGCTGTTTTATCCCTTGGCAGGTCGTTTGCAGTGGATAGGCAATGGACGACTTCAGCTTCAGTGCAACGCAGTGGGGGCTCAATTCATCGAAGCTGAGTGTGATTCAAGTTTAGACGACCTTGCTGGTGACTCCTCTATATCCTTTCAACCCAGTAACCTTTTCCCATCTGTAGATTACAGCCTCCCAATTCAAGAGCTTCCTCTGTGTTTGGTTCAGCTCACGACGTTTAAGTGTGGCGGCATTGGCATCGCCATAGCAAATTCTCACGCAATTGTTGACGGAGCAGGTGCTTTTCACTTCATCTCTGAATGGGCTAGGCTTGCAAGCGGCAAGCCTCCACAAGTAGCTCCATTTCTCGATCGGAGTGTGTTTCGAGCCGGACAACCACCTCTGCCGACGCCACCCCCTAGCCTTGATGATTACCCACAGTATAAGAATTGGCCATTATTACTTGGTCAAGCAGACAATTCAGAAGAGAGAAAGAAGAAAACCACAAAAGCATTCTTGAGGATAACGAAATCTCAAATGGAGCACTTGAGAAAGATGACAAATGATAAGCCCATGGCTCGTGGGTTTACTCGGTATGAGACTATATGTGGACATATGTGGAGAACCGCATGCGAGGCAAGAGGGCTAAAAAAGGAACAACCAACATCATTAATTATTGTCGTTGATTCGAGGAGCCGCATGAGGCCACAGTTGCCCAGAGAGTACTTTGGCACGGCAACTTTTGATGTGATAGCTCAAAGCGTGGTGGGCGATCTCTTATCGAAACCATTGGGGTTCGCTGCTAGTAAAGTAAGAGAAGCAATTGACAAGGTGACAAATGAGTATGTTAGGTCTGGTATAGAGTTGTTGAAAAACCAGAATGACCTAACAAAGTTTCAAGATATACATAAAGATGGGCCACCCTTCTATGGAAACCCAAATATTGATGTAGTGAGTTGGCTATCATTGCCCACACATGGGTTTGACTTTGGGTGGGGAAAGGAGGAACATATGGGGCTAGGATCTCATGTGTCAGATGGCAATTCTGTGCTACTTCCCAGCTTTGAAGAAGATGGTTCTATTGTGGTCGCTATATGCCTCCAACAGGTTCACATGAATGCATTTAAGAAGCATTTTTATGAGGACATTAAAGAAATGTGTGACTATATTTAG	1398	0.4499	MINIEEKKMNMPIVTIKGCSTVRPCEETWTGTMALSEWDQTSCLTHVSAIFFYRPPNTGLSVPSAIVDTLKLSLSRALVLFYPLAGRLQWIGNGRLQLQCNAVGAQFIEAECDSSLDDLAGDSSISFQPSNLFPSVDYSLPIQELPLCLVQLTTFKCGGIGIAIANSHAIVDGAGAFHFISEWARLASGKPPQVAPFLDRSVFRAGQPPLPTPPPSLDDYPQYKNWPLLLGQADNSEERKKKTTKAFLRITKSQMEHLRKMTNDKPMARGFTRYETICGHMWRTACEARGLKKEQPTSLIIVVDSRSRMRPQLPREYFGTATFDVIAQSVVGDLLSKPLGFAASKVREAIDKVTNEYVRSGIELLKNQNDLTKFQDIHKDGPPFYGNPNIDVVSWLSLPTHGFDFGWGKEEHMGLGSHVSDGNSVLLPSFEEDGSIVVAICLQQVHMNAFKKHFYEDIKEMCDYI	465

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco04g1216	465	PANTHER	TRICHOTHECENE 3-O-ACETYLTRANSFERASE	22	455	-	-
	Acco04g1216	465	Pfam	Transferase family	14	456	-	-
	Acco04g1216	465	Gene3D	-	9	217	IPR023213	-
	Acco04g1216	465	FunFam	Tryptamine hydroxycinnamoyl transferase	231	455	-	-
	Acco04g1216	465	Gene3D	-	231	457	IPR023213	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco04g1216	Acco-ChrAcco04	12201559	12203236	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco04g1216	14	456	Monolignol Biosynthesis Gene Families	AT5G48930	36.404	6.35e-96	294