Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1201 ATGGCAATTATTGTGGGAACGATAGCCATGCGTGATTATGTGGAAGCTGCCACCATTGTTTTCCTTTTCTCCATTGCTGAATGGCTTGAGTCAAGAGCAAGTCACAAGGCAAGTGCAGCAATGTCGTCGTTGATGAACATTGCTCCCCAGAAAGCAACCATAGCCGAAACAGGAGAGATTGTGGACGCCAACGAGGTCAAAGTGAACACCGTACTCGCCGTTAAAGCAGGGGAAGTGATCCCAATTGATGGAATCGTTGTAGATGGAACCTGTGAAGTTGATGAGAAAACTTTGACCGGCGAGCCATTCCCTGTTCCCAAACAAAAGGATTCTACTGTGTGGGCCGGCACCATCAATCTAAATGGTTATATAAGTGTAAAAACTAATGCCCTTGCTGAGGATTGCGTGGTGGCGAAAATGGCAAAGTTAGTGGAAGAAGCACAAAACAGTAAAACCAGGAGCCAGAGATTGATAGACAATTTTGCCAAGTTTTATACCCCAGCTGTTGTGATCATATCAACTCTTATAGCTGTGGTTCCAGTTTTGTTTAGAGTGCACAATGTGAAACATTGGTTTCATTTGGCACTTGTCGTTCTAGTAAGTGCATGTCCTTGTGCCCTTGTCCTTTCTACGCCAGTTGTGACTTTCTGTGCGTACACAAAAGCAGCCTCATCAGGTCTTCTCATCAAAGGGGGTGATTACCTTGAAACCCTTGCAAAAGTTAAGGTCATGGCCTTTGACAAAACTGGAACTATTACAAAGGGTGAATTTGTGGTGACCAATTTCCAATCTCTTTGTAGTGATATAGATTTGAAAACTTTGCTTTACTGGGTCTCAAGCATAGAAAGTAAGTCAAGTCATCCATTGGCAGCGGCAATTATCGATTATGGAAAGTCACTTTCGATTGATCCTAAGCCCGAAGAGGTGACAGACTATGAAAATTTTCCTGGAGAAGGTATTCGTGGGAAAATTGATGGGAGATATGTTTACATTGGAAATAGAAAAATTGCCACAAGAGCTGAGTCCAAGACAGTTCCTACTTTAGAAGGTGGCTCTCAGGGAGGAAAGACCATTGGCTATATATACTCAGGAGCAACTCCTATTGGAGTTTTCTCTCTTTCAGATGCTTGCCGATCTGGAGTAGTGGAGGCTATAGGGCAGCTAAAGTTATTGGGTATCGAGACTTCTATGCTTACTGGGGATAGCCATGCAGCTGCCATGCAGGCTCAAGAACAGCTGGGGCATGCTTTGGAGCAAATCCATGCAGAACTTTTACCAGAAGGAAAAGCAAAAATCATCACAGCATTCAAAAAGGAAGGAAAGACAGCCATGGTTGGAGATGGTGTAAATGATGCACCAGCATTAGCTGCAGCTGACATTGGTATCTCAATGGGCATTTCAGGTTCTGCACTAGCAAGTGAAACAGGAAACATAATTCTCATGTCAAATGACATGAGGAAGATACCACAAGCAATTAAGCTTGCGAGAAAATCTCGTTGGAAAGTAATAGAAAATATTGTATTGTCAATTGTGACCAAGTCTGCAATTCTTGGCTTAGCCATTGCTGGTCATCCGCTTGTTTGGGCAGCAGTTCTTGCTGATGTTGGGACATGCTTGTTGGTAATCTTAAACAGCATGCTCCTTCTGCGCAGAAGAGAGAAGCAGCATAGAGGAAAATGTTGTAGATCTTCCACTCAGCAACACCTCCATAAAAGTGGATGTCATGCCGATAATGGGAAATCTTCTCACCACCACCACCACCACCAACACAAGCATGATCCTCATCAGCATTCTAAACTCATAGAAAGTCATGTCCAATGTAAGTCCAGTGATGAAATCCATGAACCAAATCTCTGTCATCATGGAAGATGTGAGAAAGGTATTGTCCGGTCACATGATGCAGAAAACCAGAGTTGTTCAGGCTCTCGGGATAGGGTAATGATTGGAGCAGATAAGTGTGCAACTTCAACAGACAGTTATGGTAGTTGTTTGGAACATAGTAGCTCCCACAGCACATCACATTGCCTCAGAAGACATTGTGACCGGGATGAGGCGTCCCCAGATGGCCCCTGCCATTCCATGCACTCACACGATATAGAAAGCCAGGCTTGTTCAGGGTCGCCCCACATGATTCTTACTAGAGCACATAAATGCTCGAGTGCAAAAGAGAATCATGATTGTTTGGAACATAGCACCCACAAGAAATTACATTGCCATAACAGGAACTGTGTCCCTGTCAGTCTTACTGGTGCATCACTTGTTTCTCCCTGCCACTTAAATCTTTCTGCCAAGAAAGGAAGTGAAGAATGTAGTATTAAGCACTGCCATCATGAAATTGAGCATCAAAGTCCAGGGCCTCTATCTGACTTTAAGGTCTGTGGGGATGATAATGTTTCTGGCATCATGGACAATAAACACGCTGAATCAGCCTCAATGCACGCTCTTGGGAGTTGCGAAGGGCAAGAAAAAGGTTCTTGTTGCAAAGGTTGTCCAGACGAACGAAACGAATGTCCTGTTGTTTGCGCGCTTCTGTCATCAAATGAGATAGAAGTTGGTGCATGTTGTGAGGGCTCTTCAAAGGAACCCATTGAGTTTCCAATGACACATGCTTGTATTGGTTTGCACAAGAGAGCTATTAGCGGGTGTTGCAAGAGCTACATGAAGGAATGCTGTAGCATGCATGGACATTTATGGGTGGGTTTTGGAGGTTTATCCGAAATTGTTTCAGAACAGGTGTAG 2739 0.4396 MAIIVGTIAMRDYVEAATIVFLFSIAEWLESRASHKASAAMSSLMNIAPQKATIAETGEIVDANEVKVNTVLAVKAGEVIPIDGIVVDGTCEVDEKTLTGEPFPVPKQKDSTVWAGTINLNGYISVKTNALAEDCVVAKMAKLVEEAQNSKTRSQRLIDNFAKFYTPAVVIISTLIAVVPVLFRVHNVKHWFHLALVVLVSACPCALVLSTPVVTFCAYTKAASSGLLIKGGDYLETLAKVKVMAFDKTGTITKGEFVVTNFQSLCSDIDLKTLLYWVSSIESKSSHPLAAAIIDYGKSLSIDPKPEEVTDYENFPGEGIRGKIDGRYVYIGNRKIATRAESKTVPTLEGGSQGGKTIGYIYSGATPIGVFSLSDACRSGVVEAIGQLKLLGIETSMLTGDSHAAAMQAQEQLGHALEQIHAELLPEGKAKIITAFKKEGKTAMVGDGVNDAPALAAADIGISMGISGSALASETGNIILMSNDMRKIPQAIKLARKSRWKVIENIVLSIVTKSAILGLAIAGHPLVWAAVLADVGTCLLVILNSMLLLRRREKQHRGKCCRSSTQQHLHKSGCHADNGKSSHHHHHHQHKHDPHQHSKLIESHVQCKSSDEIHEPNLCHHGRCEKGIVRSHDAENQSCSGSRDRVMIGADKCATSTDSYGSCLEHSSSHSTSHCLRRHCDRDEASPDGPCHSMHSHDIESQACSGSPHMILTRAHKCSSAKENHDCLEHSTHKKLHCHNRNCVPVSLTGASLVSPCHLNLSAKKGSEECSIKHCHHEIEHQSPGPLSDFKVCGDDNVSGIMDNKHAESASMHALGSCEGQEKGSCCKGCPDERNECPVVCALLSSNEIEVGACCEGSSKEPIEFPMTHACIGLHKRAISGCCKSYMKECCSMHGHLWVGFGGLSEIVSEQV 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1201 912 FunFam Copper-transporting ATPase 1, putative 34 148 - -
Acco04g1201 912 SUPERFAMILY Calcium ATPase, transmembrane domain M 5 343 IPR023298 -
Acco04g1201 912 NCBIfam cadmium family heavy metal-translocating P-type ATPase 4 336 - -
Acco04g1201 912 MobiDBLite consensus disorder prediction 580 594 - -
Acco04g1201 912 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 4 551 - -
Acco04g1201 912 PRINTS H+-transporting ATPase (proton pump) signature 445 461 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco04g1201 912 PRINTS H+-transporting ATPase (proton pump) signature 477 502 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco04g1201 912 Coils Coil 140 160 - -
Acco04g1201 912 NCBIfam heavy metal translocating P-type ATPase 4 548 IPR027256 GO:0006812|GO:0016020|GO:0019829
Acco04g1201 912 Gene3D - 33 148 - -
Acco04g1201 912 SFLD Haloacid Dehalogenase 228 497 - -
Acco04g1201 912 PRINTS P-type cation-transporting ATPase superfamily signature 469 481 - -
Acco04g1201 912 PRINTS P-type cation-transporting ATPase superfamily signature 94 108 - -
Acco04g1201 912 PRINTS P-type cation-transporting ATPase superfamily signature 369 380 - -
Acco04g1201 912 PRINTS P-type cation-transporting ATPase superfamily signature 245 259 - -
Acco04g1201 912 PRINTS P-type cation-transporting ATPase superfamily signature 445 464 - -
Acco04g1201 912 PRINTS P-type cation-transporting ATPase superfamily signature 391 401 - -
Acco04g1201 912 Gene3D - 256 377 IPR023299 GO:0000166
Acco04g1201 912 MobiDBLite consensus disorder prediction 570 606 - -
Acco04g1201 912 Pfam haloacid dehalogenase-like hydrolase 241 459 - -
Acco04g1201 912 FunFam Putative cadmium/zinc-transporting ATPase 3 256 377 - -
Acco04g1201 912 SUPERFAMILY HAD-like 244 546 IPR036412 -
Acco04g1201 912 NCBIfam HAD-IC family P-type ATPase 353 521 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco04g1201 912 NCBIfam HAD-IC family P-type ATPase 19 265 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco04g1201 912 CDD P-type_ATPase_HM 10 547 - -
Acco04g1201 912 Gene3D - 236 496 IPR023214 -
Acco04g1201 912 ProSitePatterns E1-E2 ATPases phosphorylation site. 247 253 IPR018303 -
Acco04g1201 912 Pfam E1-E2 ATPase 52 223 - -
Acco04g1201 912 SFLD p-type atpase 228 497 IPR044492 -
Acco04g1201 912 SUPERFAMILY Calcium ATPase, transduction domain A 59 144 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1201 Acco-ChrAcco04 11891754 11900710 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1201 4 567 Primary Pumps ATPases AT2G19110 70.035 0.0 838