Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1177 ATGACACTCATAAACCAGAGGATTCATTGTGAGTTTTGTGACTGTGCAGTGGAACCTCCTTCACATTCTCAAGTTATTCAGGTCCCCATGGCTCAGCTAAGTAGCTTAGGAGGAGATAAGTATATTGTGATGGTCATAATATTGCTCGTCCTATTGTTGATCATTGCGTTTGTATGTCGGAAGCGTATCAAACCTGCATTTCAGACGAAAGCAAAACCTCCAATGGAGGTAATGGAGATAATAGCTCCTTCAAAGAAGCAGCAAGGATCTATGGAATTTTTTAGTGGCAGTGTTCAAGAAATGAACCATTTTGACAGTCACACCCTGAAGAAGGCAACAATGAATTTTCATCCTGATAATTTTCTTGGAAGTGGTGGATATGGTCCTGTCTTTCGGGGGAAGTTGGCAGATGGGAGACTAATTGCAGTGAAGACATTGAATCTGAACAAAGCACAACAAGGAGAAAAACAGTTTCTGTCAGAGGTGAGATTGATCACAAGCATCCAACACAAAAATCTTGTTCGTCTCCTCGGATGCTGCGTTGATGGGCCTCAAAGGACCCTTGTGTATGAATACATGAAGAACAGAAGTTTGGACCTCATAATCAATGGAGACAGTGATCAGTTTCTGGATTGGAGCACTAGGTTCCAAATCATTCTTGGAATTGCGCGGGGGTTGCAATACCTGCACGAGGATTCCCACATGAGAATCGTTCACAGAGATATCAAAGCAAGCAATATTCTTCTGGACGACAAGTTTCACCCCAAGATTGGAGACTTTGGACTGGCTAGGTTCTTCCCTGAAGACCAAGATTGCCTCAGTACCCAAATTGCTGGAACACTAGGTTATACGGCTCCTGAATATGCTACAAGAGGAGAACTATCAGAAAAGGTAGACATATACAGTTTTGGGGTTCTATTGCTCGAAATCATCAGTTGTAGAAAGAACACAGATTTTACTTTACCATCAGGAATGCAGTACCTTCCTGAATACGCGTGGAAGCTCTATGAGAAATCGATGCTGATCGATCTGATAGATCCGAAACTGCGAGAACACGGATTTGTAGAGAAGGATGTAATGCAAGCAATTCATGTGGCATTGTTGTGTATTCAATCTAGACCAAATCTAAGGCCTCCCATGTCAGAGATTGTAGCATTGTTGACCTTCAAAATTGAAATGGTTAGGACTCCAATGAGACCAATATTCCTCAATCTGAGGCATCAAGTAGTTGTTGCTGATAAAGACAAGGATGATGATCATGAGAATTGA 1269 0.4192 MTLINQRIHCEFCDCAVEPPSHSQVIQVPMAQLSSLGGDKYIVMVIILLVLLLIIAFVCRKRIKPAFQTKAKPPMEVMEIIAPSKKQQGSMEFFSGSVQEMNHFDSHTLKKATMNFHPDNFLGSGGYGPVFRGKLADGRLIAVKTLNLNKAQQGEKQFLSEVRLITSIQHKNLVRLLGCCVDGPQRTLVYEYMKNRSLDLIINGDSDQFLDWSTRFQIILGIARGLQYLHEDSHMRIVHRDIKASNILLDDKFHPKIGDFGLARFFPEDQDCLSTQIAGTLGYTAPEYATRGELSEKVDIYSFGVLLLEIISCRKNTDFTLPSGMQYLPEYAWKLYEKSMLIDLIDPKLREHGFVEKDVMQAIHVALLCIQSRPNLRPPMSEIVALLTFKIEMVRTPMRPIFLNLRHQVVVADKDKDDDHEN 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1177 422 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 193 397 - -
Acco04g1177 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Acco04g1177 422 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 35 411 - -
Acco04g1177 422 FunFam Cysteine-rich receptor-like protein kinase 10 80 192 - -
Acco04g1177 422 CDD STKc_IRAK 122 388 - -
Acco04g1177 422 SUPERFAMILY Protein kinase-like (PK-like) 95 390 IPR011009 -
Acco04g1177 422 Gene3D Transferase(Phosphotransferase) domain 1 193 396 - -
Acco04g1177 422 Pfam Protein kinase domain 118 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1177 422 SMART serkin_6 116 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1177 422 Gene3D Phosphorylase Kinase; domain 1 86 192 - -
Acco04g1177 422 ProSiteProfiles Protein kinase domain profile. 116 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1177 Acco-ChrAcco04 11310226 11312728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1177 42 403 Receptor kinase-like Gene Family AT1G56120 45.304 6.64e-101 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco04g1177 Pkinase 1.4e-46 CL0016