Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1175 ATGGAAGATGACGATGGATCATGCAACACAGGGCTGAGCCTTGGCCTGGGAATAGGAGGGTATGAGCCAAAGAAGAAGAAGCAGATAAGAGAGAACAAGCAAGTGGGTCACTACTTGGACCTACCCTTTGATGAACTTTATCGTCCCATAGGAGAAGAAACCTTTAATAATACTAGAGATCGTGAAGAAGAACATGAATTGTTCAGAATAAAGAGAATGGATCATGAAGATAACGCCGCCGCCGACAACTCCAGAAAGAAACTGAGGCTCACAAAGGATCAATCTGCGTTGCTTGAAGAAAGCTTCAAGCTACACAGTACTCTTAACCTTTCTCAGAAACATTCTCTTGCTAAGAAATTGAATCTGAGACCAAGACAAGTCGAAGTTTGGTTTCAGAACAGAAGAGCAAGGACCAAGCTGAAGCAGACGGAGATAGACTGCGAGTTCTTGAGGAAATGCTGTGAGAATCTGAGAGACGAGAATTGGAGGTTGAAGAAAGAGTTACACGAGTTACGTTCACAGAAGGTTGTCACGACGACGACCACGAAGTCGACGCCACCGCCGTTGTCCATTCAACTCCCAAAGATGACCGCCGTGACGACGACAACGTGTTCGTCATGCCAGAAACCATTCAAAGTGAATTATGACGCAAATAATAACAACAACTACTATAAAAACAGTGGGAAGCATAAATTGGAAAGCGTGGCCTTAGATTGCTATGTGGGGTAA 729 0.4431 MEDDDGSCNTGLSLGLGIGGYEPKKKKQIRENKQVGHYLDLPFDELYRPIGEETFNNTRDREEEHELFRIKRMDHEDNAAADNSRKKLRLTKDQSALLEESFKLHSTLNLSQKHSLAKKLNLRPRQVEVWFQNRRARTKLKQTEIDCEFLRKCCENLRDENWRLKKELHELRSQKVVTTTTTKSTPPPLSIQLPKMTAVTTTTCSSCQKPFKVNYDANNNNNYYKNSGKHKLESVALDCYVG 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1175 242 Gene3D - 78 146 - -
Acco04g1175 242 Coils Coil 140 174 - -
Acco04g1175 242 ProSiteProfiles 'Homeobox' domain profile. 81 141 IPR001356 GO:0003677
Acco04g1175 242 SMART HOX_1 83 145 IPR001356 GO:0003677
Acco04g1175 242 Pfam Homeodomain 85 139 IPR001356 GO:0003677
Acco04g1175 242 SMART halz 141 184 IPR003106 GO:0006355|GO:0043565
Acco04g1175 242 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 11 219 - -
Acco04g1175 242 CDD homeodomain 85 142 IPR001356 GO:0003677
Acco04g1175 242 ProSitePatterns 'Homeobox' domain signature. 116 139 IPR017970 GO:0000981|GO:0006355
Acco04g1175 242 Pfam Homeobox associated leucine zipper 141 174 IPR003106 GO:0006355|GO:0043565
Acco04g1175 242 SUPERFAMILY Homeodomain-like 83 150 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1175 Acco-ChrAcco04 11289259 11290210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1175 74 209 Homeobox Transcription Factor Family AT4G37790 60.294 3.74e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Acco04g1175 Homeodomain 1.6e-15 CL0123