Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1168 ATGGCTGTAGATCTGGTAAACCTCCCAAGGAAGATGGAAGAACAGATGGCTATTCAAGAAGCTGCTTCCGCTGGATTACAGAGCATGGAACATCTCATTCGTCTCCTCAATTCCTCTCAATCTCAGAATCTGAATCCCCACCGTCTTGACTGTTCCCAACTCACCGACTTGACCGTTTCCAAGTTCAAACAAGTCATCAACTTACTCAATCGCACTGGTCACGCTCGCTTCCGTCGTGCTCCCTCCAGTAATCCCACTCCTCCTTCTCCTTCCTCTGTTCCTCCAAATCCTTGCCAATCGAGCCCCCTCCCTCTGAATTTGGCTCAGTCATCTCAATCTCAGGGTTTGACTCTTGATTTCGCCAAGCCCTGTATGGCCAAGACGTCGTCGATTAAACCTTCGCCTGAGTTATCCGTATCTCAGTACTCTAAAGACACCTTTAGTATATCTCCTCCGATGTCCACTACTAGCTCCTCATTTATGTCTTCTATCACCGGAGACGGTAGTGTTTCCGACGGAAAAATTGGCCCCCTACTTCCTCCTCCTCCCGCTCCCGTTGTCTCCTCCGGCAAACCCCCTCTTTCCTCGTCTCACCGGAAAAGGTGTCCCGATTCCGCCTTTCCTGAGAAAATTTCATCCTCTGGTCACTGTCATTGTTCTAAGAGAAGGAAATCGCGAGTTAAAAAGACGATCCGTGTGCCGGCGATAAGCTCTAAGATCGCTGATATTCCGTCCGACGAGTTTTCTTGGAGAAAATACGGGCAGAAGCCGATCAAAGGCTCACCTTACCCTCGTGGATACTATAAGTGTAGTACCGTGAGAGGGTGTCCGGCGAGAAAGCATGTGGAGCGAGATCAAGACGATCCCAAGATGCTGATTGTGACATATGAAGGGGAGCACCGTCATGTTCTGGAACTGCGTGCGGCGGAGTGCGGCGGTTCAGGCTTCGGGCTTAGCCTTCAAGCAAGCTAA 972 0.5041 MAVDLVNLPRKMEEQMAIQEAASAGLQSMEHLIRLLNSSQSQNLNPHRLDCSQLTDLTVSKFKQVINLLNRTGHARFRRAPSSNPTPPSPSSVPPNPCQSSPLPLNLAQSSQSQGLTLDFAKPCMAKTSSIKPSPELSVSQYSKDTFSISPPMSTTSSSFMSSITGDGSVSDGKIGPLLPPPPAPVVSSGKPPLSSSHRKRCPDSAFPEKISSSGHCHCSKRRKSRVKKTIRVPAISSKIADIPSDEFSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERDQDDPKMLIVTYEGEHRHVLELRAAECGGSGFGLSLQAS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1168 323 SUPERFAMILY WRKY DNA-binding domain 242 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco04g1168 323 MobiDBLite consensus disorder prediction 150 169 - -
Acco04g1168 323 FunFam WRKY transcription factor 65 228 305 - -
Acco04g1168 323 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 305 IPR044810 GO:0003700
Acco04g1168 323 Pfam Plant zinc cluster domain 199 242 IPR018872 -
Acco04g1168 323 MobiDBLite consensus disorder prediction 150 209 - -
Acco04g1168 323 ProSiteProfiles WRKY domain profile. 239 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco04g1168 323 MobiDBLite consensus disorder prediction 73 112 - -
Acco04g1168 323 MobiDBLite consensus disorder prediction 83 101 - -
Acco04g1168 323 SMART WRKY_cls 244 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco04g1168 323 Pfam WRKY DNA -binding domain 246 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco04g1168 323 Gene3D WRKY domain 230 304 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1168 Acco-ChrAcco04 11172826 11174055 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1168 1 302 WRKY Transcription Factor Family AT2G24570 56.347 2.99e-104 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco04g1168 WRKY 5.1e-26 CL0274