Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1164 ATGGTGCACGGAACATTGTTATGTTTTCCATTTCCACAGTTTGACTCTCAAGTTCATATACATTGGAAAGGTGCTGCTGAGATAGTCCTAGCCTGTTGTGCATGGTATATAGATGCAAATGGCCAGTTAATGAAGATGGATGATGAGAAGATGAAATTTTTTCAAAAAGCTATTGACGATATGGCTGCTGATAGTTTACGTTGTGTTGCCATGGCATATAGATCATATGAAATGAAAAGTGTTCCAACTAGTGAAGAAGAACTTGCTCACTGGTCATTACCAGAGGATTTTACTGGCTATTGTTGGTCTAAAGAAGCCTATATTGATGCTTATTTGATGATCTACAACAGCCCATCGGTTGTTATAATTATGATCCCTGTCGACCTGGTGTCAAAGAAGCTGTACAACTTTGCCAAAAAGCAGGAGTTAAGAACTGGTGAGAATGCTGTTGGAATATTTCTTCTGATTTATTTCCCAGTTGTAGTACGAATGGTGACTGGTGACAATATAAAAACTGCTAAATCAATTGCGATCATGGGACGGTCTTCTCCAAATGACAAGCTTCTGCTTGTGCAAGCATTGAAGAGGAAGGGGCATGTTGTGGCTGTTACTGGAGACGGAACTAATGATGCTCCTGCCCTACATGCGGCCGATATAGGTCTTGCGATGGGTATTCAAGGGACAGAAGTTGCTAAAGAGAGTTCAGATATCATTATATTGGACGACAATTTTGCTTCGGTTGTGAAGGCTGTCGGATGGCGGCGGTCTGTATATGCAAATATTCAGAAATTTATCCAGTTCCAACTTACTGTCAATGTTGCAGCTCTTGTTATTAATCTTATTTCTGCAGTTTCATCTGGCGATGTCCCACTAAATGCAGTACAACTTCTTTGGGTAAATCTTATCATGGATACACTTGGAGCACTAGCCTTGGCAACTGAACCGCCTACAAATCATTTGATGGATCTGCGTCTAGTTGGTACAAGTGCGCCTCTTATAACAAACTACATGTGGAGGAATTTGCTTATACAGGCAGCGTATCAAGTGTCTGTTTTGCTTGTACTGACTTTCCGAGGTACGACTATATTGAATCTGAAGCATCATCACTCTGACCCTAAGAAAGTGAAGAACACTTTAATATTCAATGCATTTGTCCTCTGTCAAGTATTTAATGAATTTAATGCTCGAAAGCCAGATGAAAAGAACATATTCAGGGGAATCACAAAAAACTACCTCTTTATAGGGATAGTGGCTTTCACTGTCATACTTCAGGTCAGACTTGTTTGA 1287 0.4017 MVHGTLLCFPFPQFDSQVHIHWKGAAEIVLACCAWYIDANGQLMKMDDEKMKFFQKAIDDMAADSLRCVAMAYRSYEMKSVPTSEEELAHWSLPEDFTGYCWSKEAYIDAYLMIYNSPSVVIIMIPVDLVSKKLYNFAKKQELRTGENAVGIFLLIYFPVVVRMVTGDNIKTAKSIAIMGRSSPNDKLLLVQALKRKGHVVAVTGDGTNDAPALHAADIGLAMGIQGTEVAKESSDIIILDDNFASVVKAVGWRRSVYANIQKFIQFQLTVNVAALVINLISAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTNHLMDLRLVGTSAPLITNYMWRNLLIQAAYQVSVLLVLTFRGTTILNLKHHHSDPKKVKNTLIFNAFVLCQVFNEFNARKPDEKNIFRGITKNYLFIGIVAFTVILQVRLV 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1164 428 Gene3D - 8 98 IPR023299 GO:0000166
Acco04g1164 428 SUPERFAMILY Calcium ATPase, transmembrane domain M 255 427 IPR023298 -
Acco04g1164 428 PRINTS H+-transporting ATPase (proton pump) signature 204 220 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco04g1164 428 PRINTS H+-transporting ATPase (proton pump) signature 54 72 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco04g1164 428 PRINTS H+-transporting ATPase (proton pump) signature 411 428 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco04g1164 428 PRINTS H+-transporting ATPase (proton pump) signature 236 261 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco04g1164 428 Gene3D - 178 249 IPR023214 -
Acco04g1164 428 Gene3D - 250 426 - -
Acco04g1164 428 PANTHER CATION TRANSPORTING ATPASE 18 177 - -
Acco04g1164 428 Pfam Cation transporting ATPase, C-terminus 289 426 IPR006068 -
Acco04g1164 428 PRINTS P-type cation-transporting ATPase superfamily signature 204 223 - -
Acco04g1164 428 PRINTS P-type cation-transporting ATPase superfamily signature 158 168 - -
Acco04g1164 428 PRINTS P-type cation-transporting ATPase superfamily signature 228 240 - -
Acco04g1164 428 FunFam Calcium-transporting ATPase 221 428 - -
Acco04g1164 428 Pfam haloacid dehalogenase-like hydrolase 164 218 - -
Acco04g1164 428 NCBIfam HAD-IC family P-type ATPase 162 284 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco04g1164 428 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 15 82 IPR023299 GO:0000166
Acco04g1164 428 SUPERFAMILY HAD-like 160 309 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1164 Acco-ChrAcco04 11111624 11117142 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1164 15 428 Primary Pumps ATPases AT5G57110 61.520 8.71e-171 505