Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1163 ATGAATCTCTTGAATAATTCGCTTAGTCACCAGAGTGACATTGAGGCCGGAAGTAGCAGCCACGGCGACCATGACGACGCGGAAAGTTCGTGTGATCCATTTCTTATTCCCAGAACAAAGGATGCTCCTATTGAACGCCTCAAACGTTGGAGGATGATTGAATTTCGAATTGTGCGCTCATGTCCTGATTGTGCAATCGAAGGATTTTATTTTGGTTTCTATGGTCTGTCGAGACAGCATTCTCGCTTCCTAATGGACTGCTCTCAAGCTGCGCTTGTGCTTAATGCTTCTCGTCGGTTCCGTTACACGTTGGACTTGAAAAAAGAAGAGGAGAATCGGCAAATATTGGGAAAGGTTAGGGCTCATGCAGAAGCAATTAGAGCTGCATATCTGTTCAAAGGTGCTATAAACGGCGGGAATGGAACCCCTCCTCCTCATCCAACCCCAGTTGGTGACTTTGGGATTGGAAATGAACAACTTCTTTCAATTTCTAGGGATCATAAAGTTGATGTTCTTGAGCAATATGGAGGAGCTACAGGGCTATCAGAATTGTTGAAATCTAGTACAGAGAAGGGGATTAATGGTGATGATGCAGATATATTAAAACGAAGGAATGCTTTTGGTTCAAACAATTATCCTCGAAAGAAAGGAAGGAGTTTCTTGATGTTTATTTGGGATGCTTGCAAGGATCTGACCTTGGTTATATTAGTGGTAGCTGCTACAGCTTCATTAGCACTAGGAATAAAGTCTGAGGGCGGGGGGAAGAAAGATAACACACTAGGACTTGGTAGGGATTGGAAAAATGGAGAGGAAATTCTGTATTCGTGGTTAGGAAGGATGGTATATGGAGGAAGCATTGCTTTTGCAGTAATTCTTGTTGTTGCTGTTACAGCTATAAGTGATTATAAACAATCGCTTCAGTTTCAACATCTAAATGAGGAGAAGAGAAATATACGTTTAGAGGTTATAAGAGGTGGTAGAAGAGTTGAGATCTCTATATATGACATCGTTGTTGGTAATGTTGTGCCCCTTAATATTGGTGATCAGGTCCCTGCCGATGGTATCTTGATCACTGGTCACTCTCTTGCTATTGATGAATCAAGTATGACTGGAGAGAGCAAGATAATCTATAAGGACTCTAAAAACCATTTTCTGATGTCTGGATGTAAAGTTGCAGACGGCAGTGGCACCATGCTGGTACTCGCTGTTGGTTTAAATACTGAATGGGGGCTTCTGATGTCTAGTATTTCAGAAGACAATGGCGAAGAAACGCCCTTACAGGTACGCTTAAATGGCGTTGCCACATTCATTGGTATTGTTGGACTCTTTGTTGCTGTTATCGTTTTGATTGTGTTGTTGGCCAGATATTTCTCTGGGCATACTAGAGATGCAAATGGAAATGTTGAATTTAAGGCAGGCAAGACAAAAGTTGGTGATGCAATTAATGGGGCAATTAAAATAGTTACAGTTGCGGTGAGGAGGCTTTCAGCCTGTGAGACAATGGGCTCTGCCACAACCATTTGCAGCGATAAGACTGGTACATTGACCATAAATCAGATGACTCTGGTTGAGGCTTACAGTGGAGCAAAGAAGATTCCACCAGCTCACAAGGGGTCAGAGCTCTCCCCGAATCTCCGCGCCTTGATCATTGAAGGTGTTGCACAGAACACCAATGGTGGTGTCTATACGGTTGGGGGTGATGTTGAGGTTTCTGGATCACCAACAGAAAAGGCAATTTTACATTGGGGCATTAAGCTGGGGATGAATTTTGAGGCTGCCAGATCAGAGTCATCAATTATTCATGTTTTTCCATTTAATTCAGAGAAAAAACGTGGAGGCGTTGCAGTAAAGACGGAAGCGAGACTGACTGAAAAAGAAAATATACAGCTTGTTGAGTATGGGGAATGGACAAGGAAAATTGAAGATATGGACTCGGGGCATACTTCTTTTAACAAGGAGGACGGCAAGCACAATGAGAGATGTAATTTGAGTGGGGATGAGGGGGATGGTACATTTGTCCTTGTTGTTTAA 2031 0.4274 MNLLNNSLSHQSDIEAGSSSHGDHDDAESSCDPFLIPRTKDAPIERLKRWRMIEFRIVRSCPDCAIEGFYFGFYGLSRQHSRFLMDCSQAALVLNASRRFRYTLDLKKEEENRQILGKVRAHAEAIRAAYLFKGAINGGNGTPPPHPTPVGDFGIGNEQLLSISRDHKVDVLEQYGGATGLSELLKSSTEKGINGDDADILKRRNAFGSNNYPRKKGRSFLMFIWDACKDLTLVILVVAATASLALGIKSEGGGKKDNTLGLGRDWKNGEEILYSWLGRMVYGGSIAFAVILVVAVTAISDYKQSLQFQHLNEEKRNIRLEVIRGGRRVEISIYDIVVGNVVPLNIGDQVPADGILITGHSLAIDESSMTGESKIIYKDSKNHFLMSGCKVADGSGTMLVLAVGLNTEWGLLMSSISEDNGEETPLQVRLNGVATFIGIVGLFVAVIVLIVLLARYFSGHTRDANGNVEFKAGKTKVGDAINGAIKIVTVAVRRLSACETMGSATTICSDKTGTLTINQMTLVEAYSGAKKIPPAHKGSELSPNLRALIIEGVAQNTNGGVYTVGGDVEVSGSPTEKAILHWGIKLGMNFEAARSESSIIHVFPFNSEKKRGGVAVKTEARLTEKENIQLVEYGEWTRKIEDMDSGHTSFNKEDGKHNERCNLSGDEGDGTFVLVV 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1163 676 Gene3D - 226 456 - -
Acco04g1163 676 Pfam Cation transport ATPase (P-type) 566 625 - -
Acco04g1163 676 MobiDBLite consensus disorder prediction 17 31 - -
Acco04g1163 676 SMART Cation_ATPase_N_a_2 174 248 IPR004014 -
Acco04g1163 676 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 514 619 IPR023299 GO:0000166
Acco04g1163 676 PRINTS P-type cation-transporting ATPase superfamily signature 365 379 - -
Acco04g1163 676 PRINTS P-type cation-transporting ATPase superfamily signature 508 522 - -
Acco04g1163 676 SUPERFAMILY Calcium ATPase, transduction domain A 319 414 IPR008250 -
Acco04g1163 676 Gene3D - 505 517 IPR023214 -
Acco04g1163 676 MobiDBLite consensus disorder prediction 1 34 - -
Acco04g1163 676 FunFam Calcium-transporting ATPase 295 417 - -
Acco04g1163 676 Gene3D - 518 619 IPR023299 GO:0000166
Acco04g1163 676 ProSitePatterns E1-E2 ATPases phosphorylation site. 510 516 IPR018303 -
Acco04g1163 676 Gene3D - 88 134 - -
Acco04g1163 676 PANTHER CATION TRANSPORTING ATPASE 127 492 - -
Acco04g1163 676 Pfam Cation transporter/ATPase, N-terminus 177 242 IPR004014 -
Acco04g1163 676 Pfam Ca2+-ATPase N terminal autoinhibitory domain 89 111 IPR024750 GO:0005516
Acco04g1163 676 PRINTS Sodium/potassium-transporting ATPase signature 501 522 - -
Acco04g1163 676 PRINTS Sodium/potassium-transporting ATPase signature 284 304 - -
Acco04g1163 676 MobiDBLite consensus disorder prediction 1 16 - -
Acco04g1163 676 Pfam E1-E2 ATPase 319 455 - -
Acco04g1163 676 Gene3D - 198 417 - -
Acco04g1163 676 Gene3D - 489 504 - -
Acco04g1163 676 SUPERFAMILY Calcium ATPase, transmembrane domain M 175 502 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1163 Acco-ChrAcco04 11090207 11105220 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1163 5 618 Primary Pumps ATPases AT4G29900 56.462 0.0 694