Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1161 ATGGAGAGAATGGGACTGGCTGATGCATTTGAAAGGGAAGAAGTTTTAGGTCTGGGTATTAAGGAAGGATGGTATGATGGAGGAAGCATTGCTTTTGCAGTAATTCTTGTTGTTGCTGTCACAGCTATAAGTGATTATAAACAATCGCTTCAGTTTCAACATCTAAATGAGGAGAAGAGAAATATACGTTTAGAGGTTATAAGAGGTGGTAGAAGAGTTGAGATCTCTATATATGACATCGTTGTTGGTGACGTTGTACCCCTTAATATTGGTGATCAGGTCCCTGCCGATGGCATCTTGATCACTGGTCACTCTCTTGCTATTGATGAATCAAGCATGACTGGGGAGAGCAAGACAATCGATAAGGACTCTAAAAACCCTTTTCTGATCTCTGGATGTAAAGTTGCAGATGGCAGTGGCACCATGCTGGTACTCGCTGTTGGTTTAAATACTGAATGGGGGCTTCTGATGTCTAGTATTTCAGAAGACAATGGCGAAGAAACGCCCTTACAGGTACGCTTAAATGGCGTTGCCACATTCATTGGTATTGTTGGACTCTCTGTTGCTGTTATCGTTTTGATTGTGTTGTTGGCCAGATATTTCTCTGGGCATACTAGAGATGCAAATGGAAATGTTGAATTTAAGGCAGGCAATACAAAAGTTGGTGATGCAATCAATGCGGCAATTAAAATAGTTACAGTTGCGGTGACCATTGTTGTAGTTGCTGTGCCTGAAGGGCTTCCTCTAGCAGTTACCTTAACACTTGCCTACTCGATGAGAAAAATGATAGCGGACAAAGCTTTGGTGAGGAGGCTTTCAGCCTGTGAGACAATGGGCTCTGCCACAACCATTTGCAGTGATAAGACTGGTACATTGACCATGAATCAGATGACTGTGGTTGAGGCTTACATTGGAGCAAAGAAGATTGCTCCAGCTCCCAACAAGTCAGAGCTCTCTCCGAATCTCCACGCCTTGATCATTGAAGGTGTTGCACAGAACACCAATGGTAGTGTCTATACGGTTGGGGGTGATGTTGAGGTTTCTGGATCACCAACAGAAAAGGCAATTTTACATTGGGGCATTAAGCTGGGGATGGATTTTGAGACTGCCAGATCAGAGTCATCAATTATTCATGTTTTTCCATTTAATTCAGAGAAAAAACGTGGAGGCGTTGCAGTAAAGACGTTTGACTCTCAAGTTCATATACATTGGAAAGGTGCTGCTGAGATAGTCCTAGCCTGTTGTGCATGGTATATAGATGCAAATGGCCAGTTAATGAAGATGGATGATGAGAAGATGAAATTTTTTCAAAAAGCTATTGACGATATGGCTGCTGATAGTTTACGTTGTGTTGCCATGGCATATAGATCATATGAAATGAAAAGTGTTCCAACTAGTGAAGATGAACTTGCTCACTGGTCATTACCAGAGGATGATCTCATTTTACTGGCTATTGTTGGTCTAAAGGATCCCTGTCGACCTGGTGTCAAAGAAGCTGTACAACTTTGCCAAAAAGCAGGAATTAAGGTACGAATGGTGACTGGTGACAATATAAAAACTGCTAAATCAATTGCGGTAGAGTGTGGAATACTTCCATCATTGGAAGTAGCTGTGGAGCCAAACATCATTGAAGGAAAAACATTTCGTGCATTGCCAGATGACCAGAGAGAACAAATTGCCCAATGTTTATTGGTCATGGGACGGTCGTCTCCAAATGACAAGCTTCTGCTTGTGCAAGCATTGAGGAGGAAGGGGGATGTTGTGGCTGTTACTGGAGACGGAACTAATGATGCTCCTGCCCTACATGAGGCCGATATAGGTCTTGCAATGGGTATTCAAGGGACAGAAGTTGCTAAAGAGAGTTCAGATATCATTATTTTGGACGACAATTTTGCTTCGGTTGTGAAGGTTGTCAGATGGGGGCGGTCTGTATATGCAAATATTCAGAAATTTATCCAGTTCCAACTTACTGTCAATGTTGCAGCTCTTGTTATTAATGTTATTTCTGCAGTTTCATCTGGCAATGTCCCACTAAATGCAGTACAGCTTCTTTGGGTAAATCTTATCATGGATACACTTGGAGCACTAGCCTTGGCAACTGAACCGCCTACAAATCATTTGATGGATCTGCGTCCAGTTGGTACAAGTGCACCTCTTATAACAAACTACATGTGGAGGAATTTGCTTATACAGGCAGCGTATCAAGTGTCTGTTTTGCTTGTACTGACTTTCCGAGGTACGACTATATTGAATCTGAAGCATCATCACTCTGACCCTACGAAAGTGAAGAACACTTTAATATTCAATGCATTTGTCCTCTGTCAAGTATTTAATGAATTTAATGCTCGAAAGCCAGATGAAAAGAACATATTCAGGGGAATCACAAAAAACTACCTCTTTATAGGGATAGTGACTTTCACTGTCATACTTCAGATCATTATCATTGAATTCCTGGGGAAGTTCACTTCAACAGTGAGGCTTAATTGGCAGCAATGGCTCATCTGCGTTATCATTGGAATTATCAGCTGGCCTCTTGCTCTCTTGGGGAAATTCATACCTGTGCCAGAGAGTCGCTGTCACGAGTGGTTTTATCGGTGTTGGAGACCATAA 2610 0.4203 MERMGLADAFEREEVLGLGIKEGWYDGGSIAFAVILVVAVTAISDYKQSLQFQHLNEEKRNIRLEVIRGGRRVEISIYDIVVGDVVPLNIGDQVPADGILITGHSLAIDESSMTGESKTIDKDSKNPFLISGCKVADGSGTMLVLAVGLNTEWGLLMSSISEDNGEETPLQVRLNGVATFIGIVGLSVAVIVLIVLLARYFSGHTRDANGNVEFKAGNTKVGDAINAAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMIADKALVRRLSACETMGSATTICSDKTGTLTMNQMTVVEAYIGAKKIAPAPNKSELSPNLHALIIEGVAQNTNGSVYTVGGDVEVSGSPTEKAILHWGIKLGMDFETARSESSIIHVFPFNSEKKRGGVAVKTFDSQVHIHWKGAAEIVLACCAWYIDANGQLMKMDDEKMKFFQKAIDDMAADSLRCVAMAYRSYEMKSVPTSEDELAHWSLPEDDLILLAIVGLKDPCRPGVKEAVQLCQKAGIKVRMVTGDNIKTAKSIAVECGILPSLEVAVEPNIIEGKTFRALPDDQREQIAQCLLVMGRSSPNDKLLLVQALRRKGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVISAVSSGNVPLNAVQLLWVNLIMDTLGALALATEPPTNHLMDLRPVGTSAPLITNYMWRNLLIQAAYQVSVLLVLTFRGTTILNLKHHHSDPTKVKNTLIFNAFVLCQVFNEFNARKPDEKNIFRGITKNYLFIGIVTFTVILQIIIIEFLGKFTSTVRLNWQQWLICVIIGIISWPLALLGKFIPVPESRCHEWFYRCWRP 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1161 869 FunFam Calcium-transporting ATPase 39 161 - -
Acco04g1161 869 ProSitePatterns E1-E2 ATPases phosphorylation site. 287 293 IPR018303 -
Acco04g1161 869 PRINTS Sodium/potassium-transporting ATPase signature 28 48 - -
Acco04g1161 869 PRINTS Sodium/potassium-transporting ATPase signature 278 299 - -
Acco04g1161 869 PRINTS Sodium/potassium-transporting ATPase signature 402 420 - -
Acco04g1161 869 FunFam Calcium-transporting ATPase 608 856 - -
Acco04g1161 869 Gene3D - 335 491 IPR023299 GO:0000166
Acco04g1161 869 Gene3D - 137 329 - -
Acco04g1161 869 FunFam Calcium-transporting ATPase 295 491 - -
Acco04g1161 869 Pfam Cation transporting ATPase, C-terminus 676 852 IPR006068 -
Acco04g1161 869 NCBIfam calcium-translocating P-type ATPase, PMCA-type 21 854 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Acco04g1161 869 FunFam Calcium-transporting ATPase 484 636 - -
Acco04g1161 869 FunFam Calcium-transporting ATPase 9 plasma membrane-type 139 309 - -
Acco04g1161 869 SUPERFAMILY HAD-like 283 696 IPR036412 -
Acco04g1161 869 Pfam haloacid dehalogenase-like hydrolase 282 605 - -
Acco04g1161 869 SUPERFAMILY Calcium ATPase, transmembrane domain M 22 854 IPR023298 -
Acco04g1161 869 Pfam E1-E2 ATPase 63 262 - -
Acco04g1161 869 SFLD Haloacid Dehalogenase 267 643 - -
Acco04g1161 869 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 292 488 IPR023299 GO:0000166
Acco04g1161 869 Gene3D - 608 857 - -
Acco04g1161 869 SFLD p-type atpase 267 643 IPR044492 -
Acco04g1161 869 NCBIfam HAD-IC family P-type ATPase 226 314 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco04g1161 869 NCBIfam HAD-IC family P-type ATPase 558 672 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco04g1161 869 PANTHER CATION TRANSPORTING ATPASE 17 854 - -
Acco04g1161 869 Gene3D - 40 136 - -
Acco04g1161 869 SUPERFAMILY Calcium ATPase, transduction domain A 63 158 IPR008250 -
Acco04g1161 869 Gene3D - 492 607 IPR023214 -
Acco04g1161 869 PRINTS P-type cation-transporting ATPase superfamily signature 506 516 - -
Acco04g1161 869 PRINTS P-type cation-transporting ATPase superfamily signature 484 495 - -
Acco04g1161 869 PRINTS P-type cation-transporting ATPase superfamily signature 285 299 - -
Acco04g1161 869 PRINTS P-type cation-transporting ATPase superfamily signature 109 123 - -
Acco04g1161 869 PRINTS P-type cation-transporting ATPase superfamily signature 615 627 - -
Acco04g1161 869 PRINTS P-type cation-transporting ATPase superfamily signature 591 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1161 Acco-ChrAcco04 11052913 11062942 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1161 19 855 Primary Pumps ATPases AT5G57110 75.268 0.0 1294