Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1160 ATGAGTCTCTTGAAGAATTCGCCTAGTCACCAGAGTGACATTGAGGCCGGAAGTAGAAGCCACGGCGACCATGACGATCCGGAAAGTTCGTGTGATGCATTTTTTATTACCAGAACAAAGGATGCTCCTATTGAACGCCTCAAACGTTGGAGGCAAGCTGCGCTTGTGCTCAATGCTTCTCGTCGGTTCCGTTACACGTTGGACTTGAAAAAAGAAGAGGAGAAGCGGGATATATTGGGGAAGGTTAGGGCTCATGCAGAAGCAATTAGAGCTGCATATGTGTTCAAAGCTGCTATAAACGGCGAGAATGGAACCCCTCCTCCTCATCCAACCCCAGTTGGTGGCTTTGGGATTGGAAATGAACAACTTCTTTTAATTTCTAGGGATCATAAAGTTGATGTTCTGGAGCAATATGGAGGAGCTAGAGGACTATCAGAATTGCTGAAATCTAGTACACAGAAGGGGATTAATGGTGATGATGCAGATATATTAAAACGAAGGGATGCTTTTGGTTCAAACAATTATCCTCGAAGGAAAGGAAGGAGTTTCTTGATGTTTATGTGGGATGCTTGCAAGGATCTGACTTTGGTTATATTAATGGTAGCTGCTGCAGCTTCATTAGCACTAGGAATAAAATCTGAGGTAAGAGTGACTCAGAAAGTTATTTAG 669 0.4335 MSLLKNSPSHQSDIEAGSRSHGDHDDPESSCDAFFITRTKDAPIERLKRWRQAALVLNASRRFRYTLDLKKEEEKRDILGKVRAHAEAIRAAYVFKAAINGENGTPPPHPTPVGGFGIGNEQLLLISRDHKVDVLEQYGGARGLSELLKSSTQKGINGDDADILKRRDAFGSNNYPRRKGRSFLMFMWDACKDLTLVILMVAAAASLALGIKSEVRVTQKVI 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1160 222 PANTHER CATION TRANSPORTING ATPASE 86 214 - -
Acco04g1160 222 MobiDBLite consensus disorder prediction 1 15 - -
Acco04g1160 222 Pfam Ca2+-ATPase N terminal autoinhibitory domain 34 74 IPR024750 GO:0005516
Acco04g1160 222 Gene3D - 43 97 - -
Acco04g1160 222 SUPERFAMILY Calcium ATPase, transmembrane domain M 138 210 IPR023298 -
Acco04g1160 222 Pfam Cation transporter/ATPase, N-terminus 139 206 IPR004014 -
Acco04g1160 222 MobiDBLite consensus disorder prediction 1 28 - -
Acco04g1160 222 FunFam Calcium-transporting ATPase 42 98 - -
Acco04g1160 222 SMART Cation_ATPase_N_a_2 138 211 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1160 Acco-ChrAcco04 11044822 11047075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1160 4 214 Primary Pumps ATPases AT4G29900 60.563 1.08e-80 258