Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1149 ATGTCTGCGTGTTTAAGCGGAGCTAGTGGAAGAACTTATGGGTTCGATTTCGATTTTGTCAAATCTCCATCCACATCGACCCGAACCTCGCATACATCTTCTTCTCCTTCTTCAACCATCTCGGAATCGAGTGATTCTGTACTTGCCATCTCCACTCGTAAATCTCGAACCCGTCGAAAGCGACCCAATCAAACTTACAACGAAGCTGCTGCAATGCTTTCCACAGCTTACCCAAATCTCTTCCCCTCCGATGGCCTGAAAAAACCAGGCAAGTTCACCAAAACAACGGATAATTTTGCGGATGAATCTTCAGAATTGTTTTTCCCTTTCCCAGTATTTGATACCTCCTCTTTCTTAATCCATTGCCAACCAATCCATCAGAAGGCTGGGGGTAATTTCCCGGTGGAGCCCAAAGCGGTTAATCTAACAGAAAAAGCGTGCCAGAGTCCGGGGGAGATTAGCTCACGAGTGAGTACTACTCAGGAATTCGACGATGACTGCCAAGAAGATTTCGATGCTGAGTCGATTCTCGATGAGGAAATCGGAGAGGGAATCGATAGCATCATGGGAAGTAGGGCTGAGGATTCACACGACGCGTCTTGTCACGACGAACACGTGAATCCCCGGACTGTGGAGTCGACGGGATTTAATTTTGGCGGGAAATTCGATTTCCGTCTACGAGCTCTCCGTGGAGTCGATGAAGGGAATTATTGCTGGGGCTTTCCCGCCGTTGTCAATATGCTTGAAATCTCACCGGAAATAAAAAAGCCTACACCGCCGGCATCGGTTTCGCCGAAGAAGAAAAAGAAGAAGACTAAGAAGGTGGAAAAGCTGACGAACATCGAATCGAAGATTCCGGAATTGCCGAAGGAGAGTTCGACTCCGAAGGCGAAATCAAATCCTGGCTTGCTGTTGAAATTGAATCACAACGAGGTTTTGAATGCTTGGTCTGACCGGAGTTCACCGTTCACCGGCGACAGTCACGCCTCTGATGTGCCCGGAAATGATATCGCGGCCCGGCTGGCGCAGATAGACTTATTATGGGAGAGTGGAGAAGGAGGGGTGATGAGAGAGGCCAGCGTTATGCGCTACAAAGAAAAGCGCCGTACACGTCTCTTCTCCAGGAAGATTAGATATCAAGTTAGGAAAGTCAACGCTGATCAACGGCCCAGAACGCAGGGGCGATTTGCGAGTAGGCCCAATTGTGGATCTAAAGCCCAAAGCTCAAAGGGTAAAGCAGGCCTTCCGTCTCATCATCACTCTCAATAA 1269 0.487 MSACLSGASGRTYGFDFDFVKSPSTSTRTSHTSSSPSSTISESSDSVLAISTRKSRTRRKRPNQTYNEAAAMLSTAYPNLFPSDGLKKPGKFTKTTDNFADESSELFFPFPVFDTSSFLIHCQPIHQKAGGNFPVEPKAVNLTEKACQSPGEISSRVSTTQEFDDDCQEDFDAESILDEEIGEGIDSIMGSRAEDSHDASCHDEHVNPRTVESTGFNFGGKFDFRLRALRGVDEGNYCWGFPAVVNMLEISPEIKKPTPPASVSPKKKKKKTKKVEKLTNIESKIPELPKESSTPKAKSNPGLLLKLNHNEVLNAWSDRSSPFTGDSHASDVPGNDIAARLAQIDLLWESGEGGVMREASVMRYKEKRRTRLFSRKIRYQVRKVNADQRPRTQGRFASRPNCGSKAQSSKGKAGLPSHHHSQ 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1149 422 MobiDBLite consensus disorder prediction 23 65 - -
Acco04g1149 422 Pfam CCT motif 357 399 IPR010402 GO:0005515
Acco04g1149 422 MobiDBLite consensus disorder prediction 391 416 - -
Acco04g1149 422 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 402 - -
Acco04g1149 422 ProSiteProfiles CCT domain profile. 357 399 IPR010402 GO:0005515
Acco04g1149 422 MobiDBLite consensus disorder prediction 23 51 - -
Acco04g1149 422 MobiDBLite consensus disorder prediction 254 276 - -
Acco04g1149 422 MobiDBLite consensus disorder prediction 383 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1149 Acco-ChrAcco04 10877348 10880259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1149 290 399 C2C2-CO-like Transcription Factor Family AT1G73870 41.129 2.50e-18 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco04g1149 CCT 9.5e-17 CL0281