Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1126 ATGGGTTTGTCGGCGATATTTGGGGGTTGTTTCAAGGCGGAGGGTCAGGCGGCGGTACCGGCGAGCAAGGCCAAGGTGGTGGCGACGAAGCAGAGTCCGTATCACTGGGTATCGGTGTCGGATTTGAGCAATCCGATCAGTGCGACGCTGTCGGAGGATCTGTCGGTGTCGCTCGCCGGATCCAATCTGTATGTGTTTACGTTGGCGGAGATGAAATTGATTACTCAAGGTTTCTCTTCCGGTAACTTTCTTGGAGAAGGCGGGTTCGGACCGGTTCATAAGGGGTTCATCGACGATAAGCTCCGGCAGGGTCTTAAGGCTCAGACCGTCGCCGTAAAGCTCTTGAACTTGGACGGCTCTCAGGGCCACAAGGAGTGGTTGACGGAAGTTGTTTTTCTTGGGCAACTAAGACATTCACACCTTGTGAAGCTCATTGGATATTGCTGCGAAGAAGAACACAGGCTTCTGGTCTATGAATATCTTCCCAGAGGCAGCTTAGAAAATCAACTTTTCAGAAGATACTCAGTCTCATTGCCATGGTCCACAAGAATGAAAATCGCAGTTGGAGCTGCAAAGGGCCTTGCCTTCCTTCATGAAGCAGCTAAACCTGTTATCTACAGAGACTTCAAAGCTTCAAACATCTTGTTAGACTCAGATTACAATGCAAAGCTATCTGATTTCGGGCTGGCGAAAGATGGACCTGAGGGAGATGACACGCACGTGTCGACCCGAGTCATGGGGACTCAGGGCTACGCGGCGCCTGAATATGTCATGACGGGTCACCTGACCTCCAAGAGCGATGTTTATAGTTTTGGAGTTGTGCTTTTAGAGCTTCTAACAGGAAGAAGATCTGTGGACAAATCAAGACCATCACGAGAACAAAACCTAGTGGAGTGGGCCAGGCCGATGCTACTCGATACAAGGAAGCTAGGAAGGTTCATGGACCCTAAACTTGAAGTTCAATACTCTGAAATTGGTGCAGCCAAAGCTGCAGCATTGGCTTACCAGTGCTTGAGCCACCGGCCCAAGAACAGGCCCACCATGAGACAAGTGGTTAACATATTGGAGCCACTTCAGGACTTCGACGACGTCCCCATCGCGCCGTTCGTCTACACTGTTCCGGCCGATGACACGAACAACAACGCCGCTGCCCGGGACTGTGTTGAGCCGCCCCGAGAGAGAAAGAATCATCACCGCCGCCACAGACACCCTCTGAGATCATCGATGTCGCCACCGAGTAATAATAAGGCTGAGAATTCGAACAATTCACAGTCTAGGAATGGAAGCTCGTCGTCGAGTGGAAGTGGGTCGAACTCACCTACTTCACGTCACAATAAGACCAAGGCTGCTCAATAG 1356 0.5103 MGLSAIFGGCFKAEGQAAVPASKAKVVATKQSPYHWVSVSDLSNPISATLSEDLSVSLAGSNLYVFTLAEMKLITQGFSSGNFLGEGGFGPVHKGFIDDKLRQGLKAQTVAVKLLNLDGSQGHKEWLTEVVFLGQLRHSHLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFRRYSVSLPWSTRMKIAVGAAKGLAFLHEAAKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSKSDVYSFGVVLLELLTGRRSVDKSRPSREQNLVEWARPMLLDTRKLGRFMDPKLEVQYSEIGAAKAAALAYQCLSHRPKNRPTMRQVVNILEPLQDFDDVPIAPFVYTVPADDTNNNAAARDCVEPPRERKNHHRRHRHPLRSSMSPPSNNKAENSNNSQSRNGSSSSSGSGSNSPTSRHNKTKAAQ 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1126 451 FunFam Probable serine/threonine-protein kinase PBL8 161 371 - -
Acco04g1126 451 PANTHER OS01G0588500 PROTEIN-RELATED 57 359 - -
Acco04g1126 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Acco04g1126 451 ProSiteProfiles Protein kinase domain profile. 78 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1126 451 FunFam Serine/threonine-protein kinase BIK1 45 160 - -
Acco04g1126 451 Pfam Protein tyrosine and serine/threonine kinase 81 355 IPR001245 GO:0004672|GO:0006468
Acco04g1126 451 Gene3D Transferase(Phosphotransferase) domain 1 161 365 - -
Acco04g1126 451 Gene3D Phosphorylase Kinase; domain 1 42 160 - -
Acco04g1126 451 SUPERFAMILY Protein kinase-like (PK-like) 64 379 IPR011009 -
Acco04g1126 451 MobiDBLite consensus disorder prediction 372 451 - -
Acco04g1126 451 MobiDBLite consensus disorder prediction 407 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1126 Acco-ChrAcco04 10609038 10611142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1126 65 394 Glycoside Hydrolase AT3G07070 48.949 7.62e-100 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Acco04g1126 PK_Tyr_Ser-Thr 1.6e-47 CL0016