Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1116 ATGGCAAGTACAGCAACACTGATATTAAATCCTGCTATGGAGAGCTGTAACTCTGTTGGAAGTGATGAAAATCATACATATGCTAGTCCACAACATCAGATTACAGTATCTGCAGGGGAAAAAGAGAATCAAGTAGGTGCTTCGGATGTGCCAGAAACGTTCATTAAATGTAACCGTAATTGGACCTCAGGTGAAACCCATAATCAGGGAGGGAGGGAAGATGAACGCAGGTCAGGGGTTGATTTTCAACGTCTGCATGATTCTAGGTCTCAATCTGTGGCCTGTGACAACTGTGGTGTCCTTGGGGAGGAATCTTCAACTTCAGAGATCGATTTAACTAATGCTATGGAGGTTGAAAATAATGTTCATTGTATGAACAGTTTGGACCATTCATGTACTGTGAAGGACATTATTTCTGTTCCAACAGATCCTGAGAGTGAAGATGGCAATGGGTCGGATGGGTCTGATCGAAAACTAGTTGCTTCACCTCTTGAGATGCCAATGGAGAAAACAATGTGCGGAGCAAGCTTCCAGAAGGCTTTGGATTTGAATAGTAGACTTCTTTGGGGCTTTTCATCTGTTTGTGGAAGGAGACAGGAGATGGAGGATGCTATTGCTGCAAATCCCCATCTTTTGCAAGTTCCTTCACATATGTTAATGGATAATACTGGGGATGAAAACACTGAAAACTCAGTTGCCCACTTTTTTGCTGTCTATGATGGACATGGAGGCTGTCAGGTTGCTAATTATTGCCGGGATCGTCTTCATTCAGTGCTTGTTGAGGAAATACATGATGCAGACTCTAGTTTGGATGGAAGTACTTGGATGGACCACTGGGAGAAAGCATTCTCCAATTGTTTTCAGAAAGTTGATGACGAAGTTGCAGGAGTTCGTGCTGAGAACAATGAAAACAATAATGATGGACCAGGATCTGGTATTGAACCACTTGCTCCTGAAACTGTTGGTTCTACTGCAGTGGTTGTCATTTTATGCCAAAACCACTTAATAGTTGCAAATTGTGGGGACTCAAGAGCAGTCTTGTGTCGTGGAAAAGAGGCGCTGCCATTATCTTCTGATCACAAACCAAATAGAGAGGATGAGTGGGCCAGGATAGAAGCTGCGGGAGGAAGGATCATACAATGGAATGGGTACCGGGTGCTTGGTGTCTTGGCAGTGTCAAGGTCCATAGGTGATAGGTACTTAAAGCCATGGATAATTCCTACTCCAGAAGTCAAGTTCGTCCGTAGGGAGAAAAAAGATGAGTGCCTAATTCTGGCAAGTGATGGTTTATGGGATGTCATGACAAATGAAGAAGCCTGCGAGATTGCACAAAAACGAATCCTTCTTTGGCACAAGAAGCATGGTGATGATGGATTGACAACAGTGACAGGGCTAGGCGAGGGAGTTGATCCTGCGGCACAGTCTGCTGCAGATTACTTATCTAGAGTTGCTCTTCAAAGGGGAAGTAAAGATAACATTTCTGTTATAGTGATAGACTTGAAGGGTAAAAGAAAATTTAAGACCAAGGCATGA 1533 0.4344 MASTATLILNPAMESCNSVGSDENHTYASPQHQITVSAGEKENQVGASDVPETFIKCNRNWTSGETHNQGGREDERRSGVDFQRLHDSRSQSVACDNCGVLGEESSTSEIDLTNAMEVENNVHCMNSLDHSCTVKDIISVPTDPESEDGNGSDGSDRKLVASPLEMPMEKTMCGASFQKALDLNSRLLWGFSSVCGRRQEMEDAIAANPHLLQVPSHMLMDNTGDENTENSVAHFFAVYDGHGGCQVANYCRDRLHSVLVEEIHDADSSLDGSTWMDHWEKAFSNCFQKVDDEVAGVRAENNENNNDGPGSGIEPLAPETVGSTAVVVILCQNHLIVANCGDSRAVLCRGKEALPLSSDHKPNREDEWARIEAAGGRIIQWNGYRVLGVLAVSRSIGDRYLKPWIIPTPEVKFVRREKKDECLILASDGLWDVMTNEEACEIAQKRILLWHKKHGDDGLTTVTGLGEGVDPAAQSAADYLSRVALQRGSKDNISVIVIDLKGKRKFKTKA 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1116 510 PANTHER PROTEIN PHOSPHATASE 142 500 IPR015655 GO:0004722|GO:0006470
Acco04g1116 510 FunFam Protein phosphatase 2C 51 182 508 - -
Acco04g1116 510 SUPERFAMILY PP2C-like 183 502 IPR036457 -
Acco04g1116 510 Pfam Protein phosphatase 2C 190 493 IPR001932 -
Acco04g1116 510 ProSitePatterns PPM-type phosphatase domain signature. 235 243 IPR000222 GO:0043169
Acco04g1116 510 ProSiteProfiles PPM-type phosphatase domain profile. 188 500 IPR001932 -
Acco04g1116 510 CDD PP2Cc 190 500 IPR001932 -
Acco04g1116 510 Gene3D - 176 510 IPR036457 -
Acco04g1116 510 SMART PP2C_4 178 498 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1116 Acco-ChrAcco04 10447868 10451311 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1116 169 509 PP2C-type Phosphatase Gene Family AT4G26080 59.249 1.83e-138 405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g1116 04 10447868 10451311 Acco13g1348 13 12904738 12908127 CCT
Acco04g1116 04 10447868 10451311 Acco04g1116 04 10447868 10451311 ECH