Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1103 ATGGGAAGGAAGCCTTGCTGTAATAAAGAAGGCGTAAATAGGGGAACTTGGTCTGCGATAGAAGATGGAATCCTTTCCAACTTCATTAAACTCCACGGTGAAGGAAAATGGAGGGACGTTCCTAAACGAGCAGGGTTGAATCGATGCGGCAAGAGTTGCAGACTTCGATGGTTGAACTACCTCAGGCCTGACATTAAGAGAGGAAGCTTTTCTGAAGCTGAAGACGACCTGATTATCAGACTCCATAACCTCCTTGGCAATAGGTGGTCACTAATCGCGGGACGATTACCAGGACGAACAGATAATGAGATCAAGAATTTCTGGAACACCAATTTGAGCAAGAGGGCCAATCGAAATCATCCTCACAACAACAAACCCTCACATCCATTCACAACCAAACCTCCGATCACCTTAACATCTGCTCATCCTCAACCTAGCCCTGTGATTCGAGCTAAACCAGTCAGATGCACCAAGAAAATCATCTTTCCCGAATCCAATGGTGGCATTAATAGTGTAACTCGGGAAACCCAGAATAATACGACTGCTTCTACATCCGACACAGCACGAGTAGATGATCTTATTATCAATGATTGTTTCTCTTCCTATGGTGTTATTGAAGATTTTGACGTTGATGGCTTGCTCATACCACAACAAATGCCTGAAATTAATATTGATGATGAGGAAGCGAATGAATTAGAATGGTGTTGTGAGGATGAAGCTAATATTCTAACTCATCAGAATTGGCTGGTAGGGCAATTATTTGAATCAGCAGAACATAATGATGACTTGGATATCTCTTTTCTAAATCTACAAAGTGACTCATTCATGGACTTAGATCTATCCTGTTTGGATGGTAGGGTTTAG 864 0.4213 MGRKPCCNKEGVNRGTWSAIEDGILSNFIKLHGEGKWRDVPKRAGLNRCGKSCRLRWLNYLRPDIKRGSFSEAEDDLIIRLHNLLGNRWSLIAGRLPGRTDNEIKNFWNTNLSKRANRNHPHNNKPSHPFTTKPPITLTSAHPQPSPVIRAKPVRCTKKIIFPESNGGINSVTRETQNNTTASTSDTARVDDLIINDCFSSYGVIEDFDVDGLLIPQQMPEINIDDEEANELEWCCEDEANILTHQNWLVGQLFESAEHNDDLDISFLNLQSDSFMDLDLSCLDGRV 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1103 287 FunFam MYB-related transcription factor 13 66 - -
Acco04g1103 287 CDD SANT 69 112 IPR001005 -
Acco04g1103 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Acco04g1103 287 SMART sant 13 63 IPR001005 -
Acco04g1103 287 SMART sant 66 114 IPR001005 -
Acco04g1103 287 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Acco04g1103 287 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Acco04g1103 287 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 173 - -
Acco04g1103 287 Gene3D - 69 133 - -
Acco04g1103 287 CDD SANT 16 61 IPR001005 -
Acco04g1103 287 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Acco04g1103 287 Gene3D - 14 66 - -
Acco04g1103 287 MobiDBLite consensus disorder prediction 114 149 - -
Acco04g1103 287 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Acco04g1103 287 MobiDBLite consensus disorder prediction 114 144 - -
Acco04g1103 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Acco04g1103 287 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1103 Acco-ChrAcco04 10281932 10293285 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1103 1 212 MYB Transcription Factor Family AT1G06180 47.170 4.46e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco04g1103 Myb_DNA-binding 9.7e-13 CL0123