Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1097 ATGAACGGAGGAGGAGGCAGGAACAGGTTCCCTTTTACTCCCTCACAGTGGCAAGAGCTGGAACATCAAGCTCTCATTTTCAAGTACATGGCCTCTGGTATTCCCATTCCTCCTGATCTCGTCTTCTCCATCAAAAGAGCCTCTCTTGACTGTCCTCTTTCCTCAAGGCTCTTGACTCTCCCTTCTCATCAACACTTTGGGTGGAACTACTTGGAGATGGGCTTGGGGAGGAAGATAGATACAGAACCAGGGAGATGCAGAAGAACCGATGGGAAAAAATGGAGGTGCTCGAAAGAAGCTTACCCAAATTCAAAGTACTGTGAGAGACACATGCACAGAGGAAATAACCGTTTGAGAAAACCTCTGCAACAGCATCAACAAGGTTTCAAAACAACAACGTTAACCCCACCTACCAACAACAACACAAATTCCGTAACAGTTGCAAAAAGTAACAACACTACTCCTCCTTCACTACTCTCCCTCACCCCCACCACACCTCTCTCTGACGCCACCACCCACAATCATCATCATCATCATAATTCCTTCCTCTATAATCATCATCACCAGCCTTCATCAAGATCTCCTTCATCTGGTTTCAGCTTCTCTTTACAAGATGATAGTGCTTCTCATCACTTTAGGAACGCTGGTTATGTTTATGATGGGCTGAGAGAAGATGTGGACGAGCATGCTTTCTTCACAGAGCCTTCTGGGACGATGAGAAGCTTCTCTGCTTCATCAATGGAAGATTCTTCATGGCATCTAACGCCACTCTCAATGAGCTCATCGTCTTCTTCCTCCATGAAACAGAGGAGCAGCTACTCTGGTTTGTCCCCCACCGAGTACTCTTCTTCTTACTTGCAGCTTCAAAATCAAAACCCTAGCGAAAGTACGAACCAGCAAGGTCAAGATTGTTACCTGCTGGGATTGGGGAAACCAAACGAAGAACCTGATCAGAATCAGAAAACTGTCCATCGCTTCTTCGACGAATGGCCCAACAAGAGCAAAAACTCGTGGCTTGATCGTGACGATAAATCATCCACCACCCAGCTTTCGATTTCCATTCCCACCACCACCACGGACTCTGATCACGACCATTTTCCAGGCTTCAGTTTCAGAACCCACCAAGATGTTTGA 1134 0.4638 MNGGGGRNRFPFTPSQWQELEHQALIFKYMASGIPIPPDLVFSIKRASLDCPLSSRLLTLPSHQHFGWNYLEMGLGRKIDTEPGRCRRTDGKKWRCSKEAYPNSKYCERHMHRGNNRLRKPLQQHQQGFKTTTLTPPTNNNTNSVTVAKSNNTTPPSLLSLTPTTPLSDATTHNHHHHHNSFLYNHHHQPSSRSPSSGFSFSLQDDSASHHFRNAGYVYDGLREDVDEHAFFTEPSGTMRSFSASSMEDSSWHLTPLSMSSSSSSSMKQRSSYSGLSPTEYSSSYLQLQNQNPSESTNQQGQDCYLLGLGKPNEEPDQNQKTVHRFFDEWPNKSKNSWLDRDDKSSTTQLSISIPTTTTDSDHDHFPGFSFRTHQDV 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1097 377 Pfam QLQ 11 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Acco04g1097 377 MobiDBLite consensus disorder prediction 185 202 - -
Acco04g1097 377 MobiDBLite consensus disorder prediction 253 319 - -
Acco04g1097 377 ProSiteProfiles WRC domain profile. 80 124 IPR014977 -
Acco04g1097 377 MobiDBLite consensus disorder prediction 122 202 - -
Acco04g1097 377 MobiDBLite consensus disorder prediction 122 170 - -
Acco04g1097 377 Pfam WRC 82 121 IPR014977 -
Acco04g1097 377 MobiDBLite consensus disorder prediction 352 377 - -
Acco04g1097 377 SMART QLQ_2 10 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Acco04g1097 377 MobiDBLite consensus disorder prediction 253 304 - -
Acco04g1097 377 ProSiteProfiles QLQ domain profile. 11 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Acco04g1097 377 PANTHER GROWTH-REGULATING FACTOR 5 10 360 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1097 Acco-ChrAcco04 10178727 10180127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1097 1 126 GRF Transcription Factor Family AT3G13960 67.188 5.22e-55 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Acco04g1097 WRC 5.4e-19 No_clan