Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1074 ATGGATAGCGTCTTCTCCTTCTCGGAAGCCGAAAGACTTGCTTTCCTCCAATCCGTACTCAACACTTATGGCTGTGCTTATATCTGCCTCTGGTTCTACTGTCCCTCTTCCAATCGGCTGCTCTTCTTGGATGGTTTGTGCGACGCCGTATCAAACTGTCTGCGTGTTTTTGACCAATACAGAGGTTTGGAATTTGATGTCACTCCTGATAATTATGGCGTTCCGGGAATAGCTTTTCGGAACCACCAGTACACCTGCCTAGAGCTCCAACAATCCGATCTCTTAAGACTCGCATGCACTCCTATCCAAAGACGCTTCTTTCAGGAAGCAAGGATAAAGACGGCTGTTTTCATTGGTTGCGGCAATGGGGAAATTGAGCTTGGTTTCTCAGTCATCTCTCAAGGTGCTGATGATATTCATCAAACAGATGTTATGAGGAACTTGTTTACAGAAGAATTTTCTAGACAGTCCCATCTAGCCCAACTGAAGAATCCATCTTCATGTTCTTTGACACCAATCTTATCCCCAGCGAGCACTTGTCTCTTGCCTGAAATGCTGCAGCAGAGACAAGAGAATGAACACGAGGCCATAGTTAGAGCAATTATTCATGTTATATCTTCCCCTTCTTCTTCATCTTCTAATAGTTCAACCTTTCATCACCAAAATCTTCCTAATATACATCCAGAAGCAGGAACTAGTGCTTTTACGAGGTACAGACCTAATTCAGAAATGAGTTCCAAATTTCCCAGTTTGAGCAAGAACCGGCAACAATGCTTGCTCAAGAGATCATTCGAATTGCTCAGAGGCTTACATTACATGGGAAATACGACACTGCGTTATCAAGCAATAAGTCATGCCACTAGAGCCCACCTCCTCCATGTCATCTCTGAACGAAGAAGACGTGAGAAGCTAAACCAGAAATTTCAGGCACTTAGGTCACTACTCCCGCCAAGAACCAAGAAAGACAAAGGTTCAATACTTATAGCAGCGAAGGAGACATTGAACTCTTTGATGGCTGAGATTGAAATGATGACCAGAGGAGATCCTCAGAATGCTAAGGCACCAATGAAAGCCAAGAAATTATTATTGAGAGATCAAGAAACGAAAACCAGTAGTATCTCCACTACTGAAAGATTGAGTGTGAGAGTCTCAGATGTGGGAGGGTCGAGCTCATCAGGGGAAAGATTCATGGACCTGCAAATGACTGTGAGAGGAAGAAGCTATTATAATTCTCAGGTCCAGATATTGCTTCGCCTATTGGAATTCTTGAAAGGAGTTCAGGGACTTAGATTAGTTTCTGTGGACGCTAACACATATATAGTACAAGAAGGAGCCGCCACTAATGAAGCAACTTTGACACTCAAGATAGAGGGGAGCGAATGGGATGAGGCTGCCTTCAGAGAAGCAGTGAGCAGGGTGGTTGCTGACCTGGCAGAGTGA 1440 0.441 MDSVFSFSEAERLAFLQSVLNTYGCAYICLWFYCPSSNRLLFLDGLCDAVSNCLRVFDQYRGLEFDVTPDNYGVPGIAFRNHQYTCLELQQSDLLRLACTPIQRRFFQEARIKTAVFIGCGNGEIELGFSVISQGADDIHQTDVMRNLFTEEFSRQSHLAQLKNPSSCSLTPILSPASTCLLPEMLQQRQENEHEAIVRAIIHVISSPSSSSSNSSTFHHQNLPNIHPEAGTSAFTRYRPNSEMSSKFPSLSKNRQQCLLKRSFELLRGLHYMGNTTLRYQAISHATRAHLLHVISERRRREKLNQKFQALRSLLPPRTKKDKGSILIAAKETLNSLMAEIEMMTRGDPQNAKAPMKAKKLLLRDQETKTSSISTTERLSVRVSDVGGSSSSGERFMDLQMTVRGRSYYNSQVQILLRLLEFLKGVQGLRLVSVDANTYIVQEGAATNEATLTLKIEGSEWDEAAFREAVSRVVADLAE 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1074 479 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 100 476 IPR044658 -
Acco04g1074 479 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 288 337 IPR011598 GO:0046983
Acco04g1074 479 CDD bHLH_AtbHLH_like 293 344 IPR045239 -
Acco04g1074 479 Pfam Helix-loop-helix DNA-binding domain 293 337 IPR011598 GO:0046983
Acco04g1074 479 SMART finulus 294 343 IPR011598 GO:0046983
Acco04g1074 479 Gene3D - 288 361 IPR036638 GO:0046983
Acco04g1074 479 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 288 346 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1074 Acco-ChrAcco04 9943350 9948219 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1074 1 478 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 33.092 2.88e-59 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco04g1074 HLH 5.8e-10 No_clan