Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1066 ATGGCGCTGTTCACGTTGTCCATTCTTTCGCTGGTGAAGCTCTGCATCATTAGCTTTGCTTTGGGAGTCCAAGGATCTGGAGATTTTGCTGTTTCCCCATCCCCAGCAACCATGTCAGTGCACTCTTCACCCAGAAATTCATGGGAAACAATTGCCCCAAATACACCAGCGGTACCGAATGTTACATTATCACCTCCCACAACTCCATCACCAAAGCTGACAATGGGGGCCGAGCCATCTGCATCACCAAGTACAAGCGCCACAATATCACCATCTCCATCATTTAAGGTTGTTCCTCCACCGTCAACTGAGCCATCTGCATCACCAAGTACAAGTGCGACAATATCACCACCTCCATCATTTAAGGTTGTTCCTCCACCCTCAGCTCAGCCATCTTCACCACCAAGTGCAACAGTATTACCACCTTTATCACATAAGGTTGTTCCTCCACCCTCAACTTTACCAGGGCAAGTGCCACCATCAGTAAAACCAAGTCCACCTCAACCTGCTGTGACACCTCCAGTCTCCACACCTGATGTCCCAGCCCCCATTGCAACACCTTCTGTTGATATGCCTAAACATTCACCAGTTGGCTTGCCGGTTGAACCAGATATACGATCTAAAGGAAATGCAAATAAGAGTCACAACGTGGAGCCAGTTTCACCAGCCCCAGTTGCTAAACCTCCTGTCAATTTGCCCAAAATCTCACCGGAAAGCCCACCAACTGGGAATGGAAGTTTTCCACCTATTATTCACCAAAGGGATGCAAAGAAAGGTCATGCGCCAGAGCCAGCTTTACCAGCCCCAGCAGTACCTTCTACCAAATTGCCAAACAGTTCACCAATCGGCCAGCCAACTGGACATGGAAGTTTGCCTCCTAATATCCATAATAGGAATGCAACCTCGCCTGCACCTCCTGCCAGTTTGCCTCAAATTTCACCAGTCAGTGAACCAACTACACATGGAAGTTTGCCACCTAAAGTTCATAAAAGGATTCCAAATGAGAGTCACACCCCAGAGTCAGTGTCACCAGAATCTGTTGCACCCCCTCCAAGAAAGGTGTGGCATAACCCACCTATAGTCCACCCTGTTTCCCCACGCACAACTCCTCACATATTGACTGCACCAGTTACAGCACCATCAAGTGCATTTCACGCTAACCCACCGGCTGCCCACCCAGTTATACCAGTATTGTCTCCATCGGAATTACCAGCACCCGTTATCTCTCCTTCATCAACTCCTTCCAGAATCATCAATTGGAAAAAGGGTGGAGCACCAGTTGCTGCGCCTTTGCATAATTCATCAAAGCCACTTCCAGCTTTAATACATCCCCCAGCTCAAGCCCCTGCTGCACATGGGCATCATCATAAAAGGAACATTGTCACCAGTCCTGCTCCTGCATCATCAGATCTAGTCTCTCCTCCTACTTCAATTAACCCAGGTCAAGCAATGCCTCCTTCATCACTCCCGACAAGGGGACGAAGACATTATGCTCCTCCACCAGTGAACCCAGCTACTACATTCTCTTTCCCAACTTTGCCACCGGCAAGCCAAGTTTCACATGCTCCATCTCCATTGTTCAAATCCGGTCCTCATCCTACCAAAATACCATTTCTTTCTCCTGAATCACCTCCTCGGTCTGCTTCCAAGAGGCCTAAGACACCAGTCCTGCCTAAAGTTCAAGCACTTCCACCTCCACCTCCTAATGATGATTGTTTATCAACTGTTTGCACTGAGCCCTATACAAATTCTCCCCCTGGAGCACCTTGCAGGTGTGTCTGGCCCATGCAAGTTGGTCTTCGCCTTGGTGTTTCTCTTTATACCTTCTTTCCCTTGGTTTCAGAACTGGCTTCTGAAATTTCCACTGGGGTTCTCATGAAGCAAAGTCAAGTTCGTATAATGGGAGCTAAATCATCTGACGGGCAACCAGAGGAAACTGATGTCCTAATTGATTTGGTTCCACTTGGGGAAAGTTTTGATAACACTACAGCCTTTTTTACCTCCCAGAGATTCTGGCATAAACTGGTAGCTATAAAAGCTTCCTACTTTGGAGACTATGAAGTGTTATATGTGAGCTATCCAGGCTTACCACCATCGCCTCCTCTACCCCCAAGCATGACAATGATAGATGGCGGCCCATATTCTAATGGTAACAATGGAAGGACAATAAAGCCCATTGGGGTGGACATACCAAAAAGACAGCATAAAAATCCACTTAGTGGTAGTGTGATTGCCATTATTTCACTTTCAGCTTTTGTAGCTGTTCTTTTATGTTCTGCAGCTGCTTGGGTATTGTTGTTCAAGCGCAGAGATCATGTATCTCAAACAACATCAACTCCACGGACTTTCGCACCTTCTCTTTCCAAAACCCCTGGCACTGCGGGGTCATTGACTGGAGGTGGTACAGTTTCAGCATCTTCATCATTTCGATCTAGCCTTGCAGCTTATAAAGGTTCTGCCAAGACTTTCAGCATGAGTGACATTGAGAGAGCCACTGATAAGTTTCACACTTCAAGAATACTCGGAGAAGGTGGTTTTGGGCTTGTTTATAATGGTACTCTTGACGATGGGACAAAAGTGGCAGTCAAGGTTCTAAAGAGGGAAAATCATCATGGTGATCGTGAATTTCTAGCTGAAGTCGAGATGCTTAGCCGTTTGCACCATAGAAATTTGGTCAAGTTGATAGGCATATGCACAGAGGAGACATTCCGCTGCTTGGTTTATGAACTCATTCCAAATGGCAGTGTTGATTCCCATTTGCATGGAGTTGACAGGGAGACCAGTCCAATTGACTGGGTTGTCCGCATGAAGATAGCTCTTGGTGCTGCTCGTGGTCTGGCTTATCTGCATGAAGATTCAAGTCCCCATGTAATACATAGAGACTTCAAGTCTTCCAACATCTTGTTGGAAGATGATTTCACACCAAAAGTTTCTGATTTTGGACTGGCCCGAATAGCAACGGATGAGGAAAACAGACACATATCAACACGTGTCATGGGAACATTTGGTTACGTAGCTCCAGAGTATGCCATGACTGGGCATCTTTTGGTAAAGAGTGATGTTTACAGCTATGGTGTTGTTCTTCTTGAGCTTCTGACTGGAAGAAAGCCGGTAGACATGTCACAACCTCCCGGTCAAGAGAACCTTGTTGCATGGGCACGCCCTCTGCTGACAAGCAGAGAAGGACTCGAAGCAATCATAGATCCATCTTTGGGACCCGACGTGCCTTTTGATAGTGTGGCTAAAGTTGCAGCCATTGCTTCAATGTGTGTGCAACCAGAGGTATCGAACCGTCCTTTCATGGGAGAGGTTGTTCAAGCTTTAAAACTTGTATGTAACGAATGTGATGAAGCAAGAGAAGTATTTTCAAGAAGTTCTAGCAAGGATGATCTGTCTGTTGACTTGGATATGGGAGTCACTACTGTTTCTGGGCAACCCGATAACTTCCAAGGACAACACTTTGCTGCTACCGACATGGACCGCGAAGTAGATATCGAAAGAGGGTTACCGGCTTCAGAATTCAGTTCATCTGCAAGATTTGGCAGGCAAGAGCCTGGATCATTTAGAAGACACTCTTATTCAGGTCCTCTGAGGACTGGAAGAAGCAGAAGATTATGGCACATGTTTAGAAGGCTTTCTGGTGGTAGTGTCAGTGAACATGGAATCATGTACAAGTTATGA 3681 0.4645 MALFTLSILSLVKLCIISFALGVQGSGDFAVSPSPATMSVHSSPRNSWETIAPNTPAVPNVTLSPPTTPSPKLTMGAEPSASPSTSATISPSPSFKVVPPPSTEPSASPSTSATISPPPSFKVVPPPSAQPSSPPSATVLPPLSHKVVPPPSTLPGQVPPSVKPSPPQPAVTPPVSTPDVPAPIATPSVDMPKHSPVGLPVEPDIRSKGNANKSHNVEPVSPAPVAKPPVNLPKISPESPPTGNGSFPPIIHQRDAKKGHAPEPALPAPAVPSTKLPNSSPIGQPTGHGSLPPNIHNRNATSPAPPASLPQISPVSEPTTHGSLPPKVHKRIPNESHTPESVSPESVAPPPRKVWHNPPIVHPVSPRTTPHILTAPVTAPSSAFHANPPAAHPVIPVLSPSELPAPVISPSSTPSRIINWKKGGAPVAAPLHNSSKPLPALIHPPAQAPAAHGHHHKRNIVTSPAPASSDLVSPPTSINPGQAMPPSSLPTRGRRHYAPPPVNPATTFSFPTLPPASQVSHAPSPLFKSGPHPTKIPFLSPESPPRSASKRPKTPVLPKVQALPPPPPNDDCLSTVCTEPYTNSPPGAPCRCVWPMQVGLRLGVSLYTFFPLVSELASEISTGVLMKQSQVRIMGAKSSDGQPEETDVLIDLVPLGESFDNTTAFFTSQRFWHKLVAIKASYFGDYEVLYVSYPGLPPSPPLPPSMTMIDGGPYSNGNNGRTIKPIGVDIPKRQHKNPLSGSVIAIISLSAFVAVLLCSAAAWVLLFKRRDHVSQTTSTPRTFAPSLSKTPGTAGSLTGGGTVSASSSFRSSLAAYKGSAKTFSMSDIERATDKFHTSRILGEGGFGLVYNGTLDDGTKVAVKVLKRENHHGDREFLAEVEMLSRLHHRNLVKLIGICTEETFRCLVYELIPNGSVDSHLHGVDRETSPIDWVVRMKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLEDDFTPKVSDFGLARIATDEENRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVAWARPLLTSREGLEAIIDPSLGPDVPFDSVAKVAAIASMCVQPEVSNRPFMGEVVQALKLVCNECDEAREVFSRSSSKDDLSVDLDMGVTTVSGQPDNFQGQHFAATDMDREVDIERGLPASEFSSSARFGRQEPGSFRRHSYSGPLRTGRSRRLWHMFRRLSGGSVSEHGIMYKL 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1066 1226 PANTHER OS01G0750732 PROTEIN 564 1136 - -
Acco04g1066 1226 MobiDBLite consensus disorder prediction 222 236 - -
Acco04g1066 1226 Pfam Protein tyrosine and serine/threonine kinase 836 1108 IPR001245 GO:0004672|GO:0006468
Acco04g1066 1226 ProSitePatterns Protein kinases ATP-binding region signature. 841 863 IPR017441 GO:0005524
Acco04g1066 1226 MobiDBLite consensus disorder prediction 119 181 - -
Acco04g1066 1226 MobiDBLite consensus disorder prediction 509 524 - -
Acco04g1066 1226 MobiDBLite consensus disorder prediction 462 486 - -
Acco04g1066 1226 MobiDBLite consensus disorder prediction 1174 1197 - -
Acco04g1066 1226 MobiDBLite consensus disorder prediction 33 374 - -
Acco04g1066 1226 ProSitePatterns Serine/Threonine protein kinases active-site signature. 957 969 IPR008271 GO:0004672|GO:0006468
Acco04g1066 1226 MobiDBLite consensus disorder prediction 67 93 - -
Acco04g1066 1226 MobiDBLite consensus disorder prediction 33 58 - -
Acco04g1066 1226 SUPERFAMILY Protein kinase-like (PK-like) 816 1108 IPR011009 -
Acco04g1066 1226 MobiDBLite consensus disorder prediction 273 306 - -
Acco04g1066 1226 Gene3D Phosphorylase Kinase; domain 1 807 910 - -
Acco04g1066 1226 FunFam Receptor-like serine/threonine-protein kinase ALE2 911 1129 - -
Acco04g1066 1226 FunFam receptor-like serine/threonine-protein kinase ALE2 808 910 - -
Acco04g1066 1226 Gene3D Transferase(Phosphotransferase) domain 1 911 1131 - -
Acco04g1066 1226 MobiDBLite consensus disorder prediction 437 568 - -
Acco04g1066 1226 CDD STKc_IRAK 841 1109 - -
Acco04g1066 1226 MobiDBLite consensus disorder prediction 777 804 - -
Acco04g1066 1226 ProSiteProfiles Protein kinase domain profile. 835 1111 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1066 Acco-ChrAcco04 9816410 9824865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1066 340 1221 Receptor kinase-like Gene Family AT5G56890 55.246 0.0 878
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Acco04g1066 PK_Tyr_Ser-Thr 7.1e-48 CL0016