Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1047 ATGCGAAGAAGCGTTCAGATTAGGTATTCCTCTTCTACATTCAACGATCGTGACAGTGACAGATCCGGTGAATTCACGACGGCTTCTTCCCAGATCCGAGATCTCCAGTCTTGTTTGGTTGACGACCAGAAGCAAGCCGCCATGGAGATTAGACAACTCGCCAAGAACAAGCCGGAAAACCACCTTAAAATCGCCAAAACCGGTGCTATTAAGCCATTGATTTCGCTTATGTCGTCGCCTGATCTCCAACTCCAAGAGTACGGCGTCACCACGAATTTGACACTCTCACTGTGCGATGAGAATAAGGAGCTTCTAGTTTCGTCGGGAGCGATAAAGCCTCTGGTTGAAGCACTCAAGGCAGGGGCATCGACGACGAATTTGAGAACGTATTTGGCGGCAAGTCAGCAGAAAGCTCATCCCTGTCCTGAATGA 432 0.4907 MRRSVQIRYSSSTFNDRDSDRSGEFTTASSQIRDLQSCLVDDQKQAAMEIRQLAKNKPENHLKIAKTGAIKPLISLMSSPDLQLQEYGVTTNLTLSLCDENKELLVSSGAIKPLVEALKAGASTTNLRTYLAASQQKAHPCPE 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1047 143 PANTHER U BOX DOMAIN-CONTAINING 32 133 - -
Acco04g1047 143 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 68 110 IPR000225 GO:0005515
Acco04g1047 143 Gene3D - 17 134 IPR011989 -
Acco04g1047 143 SUPERFAMILY ARM repeat 36 120 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1047 Acco-ChrAcco04 9598539 9599392 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1047 29 122 U-box Gene Family AT3G46510 44.898 3.71e-19 80.9