Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1036 ATGGGTGGGTGTCTTCCTTGTTTTGACAAGGAGGACAGTGGGGTGAAGAAGGAGGCGGCCAAGAAGGATTACCGTAAAGAAGGTTCAGCTACTCAGTCTCATCATGTCAATAGGGTTGGCTCAGACAAGTCGAAATCAAAAAATGGCTCTGACTCTAAGAAAGAACTACCAGTTCAAAAGGATGGAACAACTGCCCACATTGCTGCACAAACTTTTATGTTTCGGGAGCTTGCAGCTGCCACAAGGAATTTCAGGCCTGAATGTTTATTAGGCGAAGGTGGTTTTGGACATGTTTATAAAGGCCGCCTTGAAGGCACGGGGCAAGTTGTTGCTGTAAAACAGCTTGACCGCAATGGCCTTCAAGGAAATCGAGAGTTCTTGGTGGAGGTACTCATGCTTAGCCTCTTGCATCACCCAAATCTTGTGAGCTTAATCGGCTATTGTGCTGATGGAGATCAGCGGCTGCTTGTCTATGAATTTATGCCTTTGGGGTCTTTGGAGGATCACCTACATGATCTAGCTCCTGACAAGGAGCCTCTGGACTGGAATACAAGGATGAAAATAGCAGCTGGAGCGGCAAAGGGGTTGGAATACTTGCATGACAAAGCAAACCCTCCTGTAATATATAGAGACCTAAAATCATCAAATATCCTGCTAGATGAGGGTTTTCATCCCAAGTTATCTGATTTCGGGCTGGCAAAACTTGGTCCAGTTGGCGATAAGACTCATGTATCAACACGAGTAATGGGGACATATGGTTATTGTGCCCCAGAATATGCTATGACTGGACAGCTGACTCTGAAGTCTGATGTCTACAGCTTTGGAGTCGTGTTCCTGGAACTTATTACTGGGCGCAAGGCTATCGATAATACACGTTCACATGGCGAGCATAATCTTGTGGCATGGGCACGACCTCTGTTTAAAGACCGGAGGAAGTTCCCCACAATGGCTGATCCTCTGCTTCAAGGCCGTTATCCAATGCGAGGGCTTTATCAAGCACTAGCAGTTGCAGCCATGTGTTTGCAAGAACAAGCTGCCACAAGGCCTCTTATTGGAGATGTTGTGACTGCTCTTACATACTTGGCCTCACAGACATATAATCCAAATGGATCTGGTCATACTAGCCGTGTTGGTCCATCAACCCCTAGGAGCAAGGAGGATCGAAAGAACATGGCAGATGGCTCGGACAGCCCCGATCATGGCCGACATCATGGATCACCTTCCACCCATAGAAATTCACCCGATTACAGGAAGAGAGATGGTGGGGATCCAAGTGCTGGGACAAGCTTGGGAAGGATTGAAACTGGTGGGGGTTCAGGAAGAAAATGGGGATTGGATGATGGAGAAAGGCAGGACTCTCAGAGAGACAGCCCTGCAAGTGCTGGAAGAGCCAGGGAAACTCCAAGGAACCGTGACCTGGACAGAGAGCGTGCAGTTGCGGAAGCAAAAGTATGGGGTGAAAATTGGAGAGAGAAAAAGCGGGCAAATGTAATGGGAAGCTTTGATGCTACAAATGAGTGA 1521 0.4773 MGGCLPCFDKEDSGVKKEAAKKDYRKEGSATQSHHVNRVGSDKSKSKNGSDSKKELPVQKDGTTAHIAAQTFMFRELAAATRNFRPECLLGEGGFGHVYKGRLEGTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVSLIGYCADGDQRLLVYEFMPLGSLEDHLHDLAPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGFHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRSHGEHNLVAWARPLFKDRRKFPTMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYNPNGSGHTSRVGPSTPRSKEDRKNMADGSDSPDHGRHHGSPSTHRNSPDYRKRDGGDPSAGTSLGRIETGGGSGRKWGLDDGERQDSQRDSPASAGRARETPRNRDLDRERAVAEAKVWGENWREKKRANVMGSFDATNE 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1036 506 PANTHER OS07G0668900 PROTEIN 27 369 - -
Acco04g1036 506 MobiDBLite consensus disorder prediction 10 60 - -
Acco04g1036 506 CDD STKc_IRAK 90 359 - -
Acco04g1036 506 FunFam Serine/threonine-protein kinase PBS1 161 376 - -
Acco04g1036 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Acco04g1036 506 MobiDBLite consensus disorder prediction 364 478 - -
Acco04g1036 506 SUPERFAMILY Protein kinase-like (PK-like) 67 358 IPR011009 -
Acco04g1036 506 FunFam Serine/threonine-protein kinase PBS1 57 160 - -
Acco04g1036 506 Pfam Protein kinase domain 89 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1036 506 ProSitePatterns Protein kinases ATP-binding region signature. 90 113 IPR017441 GO:0005524
Acco04g1036 506 Gene3D Transferase(Phosphotransferase) domain 1 161 373 - -
Acco04g1036 506 MobiDBLite consensus disorder prediction 380 422 - -
Acco04g1036 506 ProSiteProfiles Protein kinase domain profile. 84 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1036 506 SMART serkin_6 84 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1036 506 Gene3D Phosphorylase Kinase; domain 1 54 160 - -
Acco04g1036 506 MobiDBLite consensus disorder prediction 1 60 - -
Acco04g1036 506 MobiDBLite consensus disorder prediction 364 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1036 Acco-ChrAcco04 9528433 9533657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1036 4 371 Glycoside Hydrolase AT3G07070 64.674 1.04e-170 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Acco04g1036 Pkinase 2.3e-45 CL0016