Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1031 ATGGAATCGAATCGCCAGCGAACGACTCGGCGGAGGAGGAGGCAGGAGGAGCTGGTGAGGAAAGTAATTTGGCCTTCGATTTGGGGCCATTCTTGTCCGATATGTTTCAGAAGCCTCGAAGTTCATTATAAAGAATCCGCGATTCTCTCCGTGTGTTTGCACGCCTATTGCATCGAATGTATTCGCCAATGGAGTGGCTTGAAAAGAAAGTGTCCTCTTTGTAATGCAAACTTCAGCTCCTGGTTCTGTAAGCTCAGTCTTTCCTCAAAAGAGTTCCAGAAAGAAGAGTTGCCCTTGGAGGGTTTGGCCAGAAATTCTCATCAAGAAATTACCTCAAGCCGTCTAGAAGCTCCTAGACTTCTTCGTAGAGCAAGAGTTGCTTTAGATGAAAGGCGAAATAGGCCACTGCCATGGCGGCGATCATTCGGACGTCCTGGACATGCGAGTCCGGAAGTTATTGCTCAAAGGAGACTTGATTGGCGTGCAAGCATATACAAGAAGCAGCTGAAGGCAGTTCCTTTAACCTCTAGCTATCTTGAGCAGATAAATTCAAGAAATAATTTTAAAAGAGAAAAAACACTCCAGAAGATTGAGCCATGGATACAGAGGGAGCTACAAGCTGTGCTTGGTGACCCAGATCCAACAGTCATAGTTCATGTGGCAACCTCACAGTACTTAGCATGGCTGGAAGAGAAAGTTAGTTCTGGACAGTTTGATGTTGAAGAGAGGCTTATATCACCCCTGCGTCCTTACCTGCAAGATAAAGCCCGGATCTTTTGGCATGAACTAAGGTGTTATGCTGAGAGCCCCTACAATATTGAAACATATGATGCTGTAGTTGAATATAAAAAACTGGACATTCCAATCGGATGGAAATTTGAGGTCGTGGATTTGAAGTTGGCTTCTAGTCTCGAAACTGACCGTGTTTTTAACTCTGTAATCCTCGTTTTCTCAGCTGCCTTCCTGAGCAATGCTGATGCATGTGATTGGGCTGTGCAGTGCACTGTCTGCTTCCCTCAAGCTTTGATATTCAATCCTCAAGAGCATGGCCTTCTTGCTCTCCCATTTGCTTTCCATGATGGGCTGCATCACCTTGGTGTGGTCCAAAGTGAGTTGGACCTCAAGGAATCTGGGAGTGCCAGGTGGTGGTACTAA 1155 0.4589 MESNRQRTTRRRRRQEELVRKVIWPSIWGHSCPICFRSLEVHYKESAILSVCLHAYCIECIRQWSGLKRKCPLCNANFSSWFCKLSLSSKEFQKEELPLEGLARNSHQEITSSRLEAPRLLRRARVALDERRNRPLPWRRSFGRPGHASPEVIAQRRLDWRASIYKKQLKAVPLTSSYLEQINSRNNFKREKTLQKIEPWIQRELQAVLGDPDPTVIVHVATSQYLAWLEEKVSSGQFDVEERLISPLRPYLQDKARIFWHELRCYAESPYNIETYDAVVEYKKLDIPIGWKFEVVDLKLASSLETDRVFNSVILVFSAAFLSNADACDWAVQCTVCFPQALIFNPQEHGLLALPFAFHDGLHHLGVVQSELDLKESGSARWWY 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1031 384 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TOPORS 15 284 - -
Acco04g1031 384 Pfam Ring finger domain 31 75 IPR001841 -
Acco04g1031 384 ProSiteProfiles Zinc finger RING-type profile. 32 75 IPR001841 -
Acco04g1031 384 SMART ring_2 32 74 IPR001841 -
Acco04g1031 384 ProSitePatterns Zinc finger RING-type signature. 52 61 IPR017907 -
Acco04g1031 384 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 29 94 IPR013083 -
Acco04g1031 384 SUPERFAMILY RING/U-box 31 81 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1031 21 263 C3H Transcription Factor Family AT2G39100 47.200 4.26e-72 224