Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1026 ATGCCAAGTTCTAGAGCCTCATCAGGGAAGAAAACTCATATGGGTTTGCTTCTTCAAACTAACTCATCTTCTTTTGGTGGACAGAGAAGAGGAAGAAGAAAGCAAGGAGAAGCAGGGAGGTTTCTGGGAGTGAGAAGAAGACCTTGGGGGAGATATGCTGCAGAAATTAGAGACCCAACAACTAAAGAAAGACACTGGCTTGGCACCTTTGATACTGCTCAAGAAGCTGCTTTAGCTTATGACAGAGCTGCTTTGTCCATTAAAGGAAGCCAAGCAAGAACCAACTTTGCTTACACTGACATTAACACAACCTTTGGCAATACTCTTGTTTGTCCCTTTGATGATGTTCATCAGCTTCAGTCACTCTTTAACACTCCTCGGATGAAACAGTCAACAAACAATCTGCGGAACAGCCCACCTCAGCATTCTGAGACTACTACTACTACTGTTTCTGCATGTGATCATCCCTCCTCCTCTTCTTCTTCTTCAGCTCAGGAGGTTGGTGATAATAACTTGTTCTTCTTCTCCAATGATGATTCTAAATCAGGTTACTTGGAATGCATAGTTCCTGATATCTGTTTTAGACCTTCTTCTTCCAACGATACCAACAATGACTTGATTCCCTGTGCTGAACAAACAAGTGACCAAAAGATAACTCAAGAAGCAGTGAAGAACATGGCCTCATCAAGCTCTGGAGATTTCACTTACCCAAATTATGAACTTGGTCAAGGAACAATCTGGGATTGGAGCTGCAGTGAACTTGCTGCTATATTTAACAGTCCATTGAAAGTTGAAGATACAGACAGTTCTATCTGTGGGATATTGTCTCAACCTGCTGCTACTTCATCAACCAATTATGTTCAATCACTTCCTTCATTTGATGTTGATTTCTCATACACACTCTTCTGA 909 0.4158 MPSSRASSGKKTHMGLLLQTNSSSFGGQRRGRRKQGEAGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSIKGSQARTNFAYTDINTTFGNTLVCPFDDVHQLQSLFNTPRMKQSTNNLRNSPPQHSETTTTTVSACDHPSSSSSSSAQEVGDNNLFFFSNDDSKSGYLECIVPDICFRPSSSNDTNNDLIPCAEQTSDQKITQEAVKNMASSSSGDFTYPNYELGQGTIWDWSCSELAAIFNSPLKVEDTDSSICGILSQPAATSSTNYVQSLPSFDVDFSYTLF 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1026 302 Gene3D AP2/ERF domain 40 98 IPR036955 GO:0003700|GO:0006355
Acco04g1026 302 MobiDBLite consensus disorder prediction 127 165 - -
Acco04g1026 302 FunFam Ethylene-responsive transcription factor 2 40 98 - -
Acco04g1026 302 Pfam AP2 domain 43 89 IPR001471 GO:0003700|GO:0006355
Acco04g1026 302 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 25 229 - -
Acco04g1026 302 MobiDBLite consensus disorder prediction 1 38 - -
Acco04g1026 302 CDD AP2 40 99 IPR001471 GO:0003700|GO:0006355
Acco04g1026 302 MobiDBLite consensus disorder prediction 1 29 - -
Acco04g1026 302 SMART rav1_2 40 103 IPR001471 GO:0003700|GO:0006355
Acco04g1026 302 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Acco04g1026 302 PRINTS Ethylene responsive element binding protein signature 63 79 IPR001471 GO:0003700|GO:0006355
Acco04g1026 302 SUPERFAMILY DNA-binding domain 41 98 IPR016177 GO:0003677
Acco04g1026 302 ProSiteProfiles AP2/ERF domain profile. 40 97 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1026 Acco-ChrAcco04 9433936 9434844 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1026 11 196 AP2-EREBP Transcription Factor Family AT5G18560 43.913 3.15e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco04g1026 AP2 3.3e-12 CL0081