Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1022 ATGGATTCTAGGAGGGACACGGGAGGTGTTGCAGGCACGGTGCTAATCCCGATGCGGTTTGTGTGGCCATATGGGGGAAGAAGTGTGTATCTTAGTGGTTCTTTTACACGGTGGTCTGAGCTTCTACCAATGTCGCCCGTCGAGGGTTGCCCAACTGTATTTCAAGTTATTTATAGCTTGACCCCTGGTTATCATCAGTACAAGTTTTTTGTTGATGGAGAATGGAGACATGATGAGCATCAACCTTATGTACCTGGAGAATATGGGATAGTTAACACTGTCATGCTGGCTACTGATCCTAATTTCATGCCTGTCGTAACACCGGACCCAACTGGATCAAACATGGATGTGGATAATGAGGCTTTTCGGCGTGTGGTCCGCTTGACAGATGGTACATTGACAGAAGTACTGCCGAGAATATCTGATGCCGATGTCCAGATGTCCCGGCAGCGCATTAATGCATTCTTGACAATGCACACAGCTTATGAATTACTTCCTGAGTCAGGCAAGGTTGTTGCTTTGGACATTGATCTGCCAGTGAAACAAGCATTTCACATTTTGCATGAGCAGGGAATCCCTATGGCTCCTCTCTGGGACTTCAGCAAAGGGCAGTTTGTTGGTGTTCTCAGTGCTTTGGATTTTATTTTAATTTTGAGAGAGCTTGGAAATCATGGATCCAATCTGACAGAAGAGGAGCTTGAAACACATACCATATCTGCTTGGAAAGAAGGAAAATCATATCTTAGCAGACAAAACAATGGACCAGGAGCAGCATTTTCAAGACATTTTGTTAGTGGTGGGCCGTATGATAATTTAAAGGATGTTTCCTTGAAGATCCTGCAAAATGGAGTTTCAACTGTTCCTATTATCCATTCTTCTTCTGAAGATGGTTTATATTCTCAATTATTACATCTAGCTTCGCTTTCTGGAATTCTTAAATGCATTTGCAGGTATTTTAGGCATTGTGCCAATACATTGCCTATTCTTCAACTACCCATTTGTGCAATTCCAGTTGGCACATGGGTGCCCAAAATTGGGGAGTCAAACCGGCAGCCCTTAGCAATGTTGAAACCAAGTGCTTCTCTCGCTTCAGCCCTAAATTTGTTAGTCCAAGCCCAAGTAAGTTCAATACCAATAGTTGACGATAATGACTCATTGTTGGATATATATTGCCGGAGTGATATAACAGCTTTGGCAAAGGACAGAGCTTATACACATATTAATCTCGATGAAATGACTGTTCATCAGGCGTTGCAATTGGGTCAGGATTCTTATCAGCCTTATGAACTTAGAAGTCAAAGATGCCAGATGTGCTTGCGATCTGATTCTCTCCATAAAGTGATGGAACGGCTGGCTAATCCAGGTGTCAGGCGGTTAGTCATTGTGGAAGCTGGCAGCAAACGTGTAGAAGGCATTGTTTCACTAACTGACATATTCAAGTTCTTGCTTGGTTAG 1455 0.4309 MDSRRDTGGVAGTVLIPMRFVWPYGGRSVYLSGSFTRWSELLPMSPVEGCPTVFQVIYSLTPGYHQYKFFVDGEWRHDEHQPYVPGEYGIVNTVMLATDPNFMPVVTPDPTGSNMDVDNEAFRRVVRLTDGTLTEVLPRISDADVQMSRQRINAFLTMHTAYELLPESGKVVALDIDLPVKQAFHILHEQGIPMAPLWDFSKGQFVGVLSALDFILILRELGNHGSNLTEEELETHTISAWKEGKSYLSRQNNGPGAAFSRHFVSGGPYDNLKDVSLKILQNGVSTVPIIHSSSEDGLYSQLLHLASLSGILKCICRYFRHCANTLPILQLPICAIPVGTWVPKIGESNRQPLAMLKPSASLASALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDRAYTHINLDEMTVHQALQLGQDSYQPYELRSQRCQMCLRSDSLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLTDIFKFLLG 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1022 484 Pfam CBS domain 437 483 IPR000644 -
Acco04g1022 484 Pfam CBS domain 351 396 IPR000644 -
Acco04g1022 484 Gene3D - 138 324 IPR046342 -
Acco04g1022 484 CDD E_set_AMPKbeta_like_N 17 94 - -
Acco04g1022 484 ProSiteProfiles CBS domain profile. 348 405 IPR000644 -
Acco04g1022 484 SMART cbs_1 170 219 IPR000644 -
Acco04g1022 484 SMART cbs_1 352 400 IPR000644 -
Acco04g1022 484 SMART cbs_1 434 483 IPR000644 -
Acco04g1022 484 Gene3D Immunoglobulins 16 106 IPR013783 -
Acco04g1022 484 ProSiteProfiles CBS domain profile. 430 484 IPR000644 -
Acco04g1022 484 SUPERFAMILY E set domains 16 97 IPR014756 -
Acco04g1022 484 SUPERFAMILY CBS-domain pair 151 321 IPR046342 -
Acco04g1022 484 ProSiteProfiles CBS domain profile. 164 226 IPR000644 -
Acco04g1022 484 Pfam Glycogen recognition site of AMP-activated protein kinase 16 98 IPR032640 -
Acco04g1022 484 Gene3D - 332 484 IPR046342 -
Acco04g1022 484 FunFam Sucrose nonfermenting 4-like protein 13 98 - -
Acco04g1022 484 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 144 482 - -
Acco04g1022 484 SUPERFAMILY CBS-domain pair 350 483 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1022 Acco-ChrAcco04 9397494 9404006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1022 6 106 Protein tyrosine phosphatase (PTP) family AT3G01510 30.769 2.16e-06 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g1022 04 9397494 9404006 Acco04g1022 04 9397494 9404006 ECH