Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1013 ATGGGTATGTTGAACTCACTGCATTTGAAACTGGCTTTGCTGGCTGCCACGGCCGTGGCGGCGGCGGCGGCGGCCGAAGCCCAGACGAAACCGGGCTGCAACTATACATGTGGGAACGTGAGCATCCCGTATCCCTTTGGCACTAGCGAGAACTGCTACATCAATAAATCATTTTCCGTCACTTGCACAACCACCACGTCACCATCTGGAAAAACCACAACACAATTGATTTACGGCGATAATATACCAGTCCTCAACATCTCCCTGGATCCTCCTGAATTAACCGTCTCCGCAAACGTTTCCTACCATTGCTATAATTCAAGCTATTCGTATAATTGGATACGGGTCGGCAAGTTTTCTATATCAAACACGGAGAACAGATTCACTGTGGTGGGTTGTGACACCTACGCTTACTTCCAGGACCTGAGAAGCACGTTTTGGACTGGCTGCTCGTTGAGTTGCAGTAACGAGACGAGGTTTGAGGAAGCAGGGGCGTGCTCTGGTGTGGGATGCTGTCAGACCAGTTTTCCTCAAGCCATCAGGAACTATGACATCACCATAAGGAGCTATAAGAATTACACGAAGGTGCATGACTTCAACCCTTGCGGCTATGCGTTTGTTGCCAAGGAAGGATCTTTCAACTTCTCATATCGAGAGCTGCTTGATCTCAGCAACAGAACACAATTTCCCCTGGTCTTGGATTGGGTTGTTTCCAATCAGACATGTCGTGAAGCCAAGAAAGATGCAAGGAGCTATGCCTGCAAGCAAAACAGTAGATGTGAAGACTCACAAAGTGGTATTGGGTACTACTGCGTATGTGAAGATGGTTTCCGAGGCAATCCCTATCTCTCTACCGGCTGCAAAGATATTAATGAGTGCGAGGAACAGAATAACTGCAGTAGGATATGCAACAATTTCGAAGGACATTATAAGTGTTCATGTCCGTGGGGTTATAGAGGCGACGGCTATAAAAACGAGTCAGGCTGCAAGTTCCCCATTGTAGAAATTTCACTAGGCATTTCCGTAGGCACGCTTGTTATCTTTACATTGATCTCAATTTTATGCTGGGGAAACAAGCAAAGAGCACTAAAACAACTTAGAAGACAATATTTTGAGCAAAATGGAGGAAATTATATGCTGCAGCAACTTCATCAACAACAAGGTTACACTGATAGAACCAAAATTTTTACTGAAGACGAGCTCAAAACTGCCACAAATAACTTTGATGAGAGCAAAATTCTCGGTCGTGGAGGACAAGGCACGGTTTACAAGGGCATATTACCAGATAACTCACTTGTTGCCATTAAAAAGTCCAGAGTAGGAGGTGACTCAAGACAAGTTAAGGATTTTATCAATGAAGTCACTGTACTTTCCCAAATCAACCATAGGAATGTGGTTAAACTTTTTGGGTGTTGTCTTGAAACTGAAGTTCCCTTGTTGGTTTATGAGTTTGTGGACAATGGCACCCTTCTTGACCATATAGACCCACTAAAGAATGAGCACTCTCTTTTGTGGGAGACTCGATTAAGGATAGCTGCAGAAACAGCCGAGGCCATTTCATATTTACACTCTGCGGCTTCTATTCCAATTATTCATCGCGATATTAAATCTGCCAACATACTATTAGATCATAGTCACCAAGCAAAAGTTTCTGACTTTGGAGCTTCAAGACTTGTTCCACTTGATGAAACTCAAGTGACCACCGTGGTTCAAGGGACACTGGGATATTTGGACCCAGAGTACCTCCTTACAGGTCAACTTAATGAGAAAAGTGATGTTTATAGCTTTGGGGTTGTGCTTGTGGAGCTCATCACTGGGAATAAAGCGGTTGAATTCACTAGGCCAGAACAAAAAAATTTGGCCATGTACTTTACATCTTCAATGAAAGAGGACAACTTATGGCAGATTCTTGACAATCGAGTGTTGGATCAGAAGAATGCGGAGCAATTAAAGGAGGTTGCTTTCTTAGCAAGGAGGTGCATTAGAGTGAATGGGGAGGAAAGGCCGACTATGAAAGAAGTAGCAACAGAATTAGGGGGTCTAATTGCTATGGAAAAGCATCCTTGGGTAGGAGGGGATATGATGTCTGAAGAATGTGAACGCTTGCTTGGTCATGTAGCTGATGGATATAGGAATGCTAGTGCTAGCACTTCAGCTGCCTATGATAGCATCCAGAAACAATTAGCATTTGAGATTGAAGATGGGCGATGA 2211 0.4401 MGMLNSLHLKLALLAATAVAAAAAAEAQTKPGCNYTCGNVSIPYPFGTSENCYINKSFSVTCTTTTSPSGKTTTQLIYGDNIPVLNISLDPPELTVSANVSYHCYNSSYSYNWIRVGKFSISNTENRFTVVGCDTYAYFQDLRSTFWTGCSLSCSNETRFEEAGACSGVGCCQTSFPQAIRNYDITIRSYKNYTKVHDFNPCGYAFVAKEGSFNFSYRELLDLSNRTQFPLVLDWVVSNQTCREAKKDARSYACKQNSRCEDSQSGIGYYCVCEDGFRGNPYLSTGCKDINECEEQNNCSRICNNFEGHYKCSCPWGYRGDGYKNESGCKFPIVEISLGISVGTLVIFTLISILCWGNKQRALKQLRRQYFEQNGGNYMLQQLHQQQGYTDRTKIFTEDELKTATNNFDESKILGRGGQGTVYKGILPDNSLVAIKKSRVGGDSRQVKDFINEVTVLSQINHRNVVKLFGCCLETEVPLLVYEFVDNGTLLDHIDPLKNEHSLLWETRLRIAAETAEAISYLHSAASIPIIHRDIKSANILLDHSHQAKVSDFGASRLVPLDETQVTTVVQGTLGYLDPEYLLTGQLNEKSDVYSFGVVLVELITGNKAVEFTRPEQKNLAMYFTSSMKEDNLWQILDNRVLDQKNAEQLKEVAFLARRCIRVNGEERPTMKEVATELGGLIAMEKHPWVGGDMMSEECERLLGHVADGYRNASASTSAAYDSIQKQLAFEIEDGR 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1013 736 SMART egfca_6 289 330 IPR001881 GO:0005509
Acco04g1013 736 Pfam Wall-associated receptor kinase galacturonan-binding 33 95 IPR025287 GO:0030247
Acco04g1013 736 ProSitePatterns Calcium-binding EGF-like domain signature. 289 312 IPR018097 GO:0005509
Acco04g1013 736 CDD EGF_CA 289 321 - -
Acco04g1013 736 SUPERFAMILY EGF/Laminin 289 323 - -
Acco04g1013 736 FunFam Fibrillin 2 288 326 - -
Acco04g1013 736 SMART serkin_6 408 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1013 736 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 303 314 IPR000152 -
Acco04g1013 736 Gene3D Phosphorylase Kinase; domain 1 378 484 - -
Acco04g1013 736 Pfam Protein kinase domain 409 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1013 736 FunFam Wall-associated receptor kinase 2 485 701 - -
Acco04g1013 736 FunFam Wall-associated receptor kinase 2 240 287 - -
Acco04g1013 736 ProSitePatterns Serine/Threonine protein kinases active-site signature. 530 542 IPR008271 GO:0004672|GO:0006468
Acco04g1013 736 FunFam Wall-associated receptor kinase 2 378 484 - -
Acco04g1013 736 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 20 681 IPR045274 GO:0007166
Acco04g1013 736 Gene3D Laminin 240 291 - -
Acco04g1013 736 SMART egf_5 292 330 IPR000742 -
Acco04g1013 736 SMART egf_5 241 288 IPR000742 -
Acco04g1013 736 Gene3D Transferase(Phosphotransferase) domain 1 485 689 - -
Acco04g1013 736 ProSiteProfiles Protein kinase domain profile. 408 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1013 736 SUPERFAMILY Protein kinase-like (PK-like) 389 676 IPR011009 -
Acco04g1013 736 CDD STKc_IRAK 414 681 - -
Acco04g1013 736 Gene3D Laminin 292 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1013 Acco-ChrAcco04 9343648 9347203 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1013 19 736 Receptor kinase-like Gene Family AT1G21230 47.587 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Acco04g1013 Pkinase 9.2e-49 CL0016