Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1011 ATGACATACAAAGATACACGGACTTCAATCATTAAGCAAAGACATGAAACCAAGATTTATAAATGGGGCTATGAAGAGGAAAAGATAGCTGTAAGTGTACTTTCTTCAAAGCCCATAGCTGGCATGGAAAAGACAAACCAGACCTACAAGCTCATCTACATCATGGAAGCTCAAATCAATAACCCTCCTCATAGAAGTTATGCAGTTCCCATTTCAGGCAACGGCTATAAAAACGGGTCAGGCTGCAAGTTCCCCATCATAGAAATTGCACTGGGCATTTCCATAGGCATGCTTGTTATCTTTACATTGGTCTCAACTTTATGCTGGGGAAACAAGCAAAGAGCCCTAAAACAACTTAGAAGACAATATTTTGAGCAAAATGGAGGAAATTATATGCTGCAGCAACTTTATCAACAACAAGGTTACACTGATAGAACCAAAATTTTTACTGAAGACGAGCTCAAAATTGCCGCAAATAACTTTGATGAGAGCAGAATTCTTGATCATAGTCACCAAGCAAAAGTTTATGACTTTGGAGCTTCAAGACTTATTCCACTTGATGAAACTCAAGTTTCCACCGTGGTTCAAGGGACACTAGGATACCTGGATCCAGAGTACCTCCTTACAGGTCAACTTAATGAGAAAAGTGATGTTTATAGCTTTGGGGTTGTGCTTGTGGAGCTCATCACTGGGAATAAAGCGGTTGAATTCACTAGGCCAGAACAAAAAAATTTGGCTATGTACTTTACATCTTCAATGAAAGAAGACAACTTATGGCAGATTCTTGACAGTCGAGTGTTGGATCAGAAGAATGCAGAGCAATTAAAGGAGGTTGCTTTCTTAGCAAGGAGGTGCATTAGAGTGAATGGGGAGGAAAGGCCAACTATGAAAGAAGTAGCAACAGATTTAGGGGGTCTAATTGCTATGAAAAAGCATCCTTGGGTAGAAGGAGGGGATATGATGTCTGAAGAATGTGAATGCTTGCTTGGTCATGTAGATGATGGATATAAGAATGCTAGTGCTGGCACTTCAGCGGCCTATGATAGCATCCAGAAACAATTAGCACTTGAGATTGAAGATGGGCGATAA 1089 0.4031 MTYKDTRTSIIKQRHETKIYKWGYEEEKIAVSVLSSKPIAGMEKTNQTYKLIYIMEAQINNPPHRSYAVPISGNGYKNGSGCKFPIIEIALGISIGMLVIFTLVSTLCWGNKQRALKQLRRQYFEQNGGNYMLQQLYQQQGYTDRTKIFTEDELKIAANNFDESRILDHSHQAKVYDFGASRLIPLDETQVSTVVQGTLGYLDPEYLLTGQLNEKSDVYSFGVVLVELITGNKAVEFTRPEQKNLAMYFTSSMKEDNLWQILDSRVLDQKNAEQLKEVAFLARRCIRVNGEERPTMKEVATDLGGLIAMKKHPWVEGGDMMSEECECLLGHVDDGYKNASAGTSAAYDSIQKQLALEIEDGR 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1011 362 SUPERFAMILY Protein kinase-like (PK-like) 167 316 IPR011009 -
Acco04g1011 362 Gene3D Transferase(Phosphotransferase) domain 1 157 317 - -
Acco04g1011 362 Pfam Protein kinase domain 167 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1011 362 SMART serkin_6 101 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1011 362 ProSiteProfiles Protein kinase domain profile. 1 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1011 362 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 63 169 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1011 Acco-ChrAcco04 9333782 9337719 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1011 166 362 Receptor kinase-like Gene Family AT1G21240 51.000 1.66e-54 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Acco04g1011 Pkinase 4.9e-15 CL0016