Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1010 ATGGGTTTGTTGAACGCACTACAATCGAAGCTGGCATTGCTAGTCACCACCACGGCCGCGGCGCTGGTGGCAGCGGAAGCCCAGACGAAACCGGGTTGCAACTATACGTGTGGGAACGTGAGCATCCCATATCCCTTTGGCACTAGTGAAAACTGCTACAGAAATGAAAATGTAAATTTCTTCCTAAACTGCACAACCACCACTTCCTCATCATCATCTGGAGAAGCCACAACAGAATTGATTTTCGGCAAGAATTTACCAGTTCACAACATCTCCCTAGATCCTCCTGAATTAACCCTTCCCAGACCCATATCCAAGCATTGCTATAATTCAAACGATTATGCATATGGGAATGCAATGTGGTTCCCGAAATATTCTATATCAAACACAAAGAACAGATTCATTGTGGTGGGGTGTGACACCTACGCTTTCATCATGGACCTGAACGCCACATTTACAACTGGTTGTGTGTCGAGTTGCAATAACGAGACGAGGTTTGAGGAAGCAGGGGCATGCTCTGGTGTGGGATGTTGCCAAACCAGTTTCCCCGGAACCATAAGGGACTATAACATCACCTTAAAGAGCTTTAACAATTACACGATGGTGCGTGACTTCAACCCTTGCGGCTATGCGTTTATTGCCAAGGAAGGATCCTTCAACTTCTCATATGGAGAGCTGCGTAATCTCAGCAACAGAATAGAATTTCCCGTGGTTCTGGATTGGACTGTTTCCAATCACACATGCCTTGAAGCCCAAAAAAATCAAACGAGCTATGCCTGCAAGCAAAACAGTACATGTAAAGAGTCAGGAAGTAGTATTGGGTACTACTGCGTATGTGCAGATGGTTTCAGAGGCAATCCCTATCTCGATACCGGCTGCAAAGGCATTTCTGTAAGCTTGCTTGTTATCTTTACAACAGTCTTCACATTATGCTGGGGAAACAAGCAAAGAGCACTAAAACAACTTAGAAGACAAAAGTATATGCTGCACCAACTTCATCAGCAACAAAGATACACTGAAAGAACCAAACTTTTTACTGAAGACGAGCTCAAAATTGCCACAAACGACTTTAATGAGAGTAGAATTCTCGGTCGAGGAGGACAAGGCACAGTTTACAAGGGCATATTGCCAGATAACTCGCTTGTTGCCATTAAAAAGTCTAGAGTTGGAGGTGACTCAAGACAAGTTAATGATTTTATCAATGAAGTGACTGTACTTTCCCAAATCAACCATAGGAACGTGGTTAAACTTTGTGGGTGTTGTCTTGAAATTGAAGTTCCCTTGTTGGTTTATGAGTTTGTCAACAATGGCACCCTTCTTGACCATATAGACCCACTAAAGAATGAGCATTCTCTTTCCTGGGAGGCTCGATTAAGGATAGCTGCAGAAACAGCTGGGGCCATTTCATATTTACACTCTTCTGCTTCCATCCCAATTATTCATCGTGATATTAAATCTAACAACATACTATTAGACCACAATCACATAGCAAAAGTTTCTGACTTTGGTGCTTCAAGACTTATTCCTCTTGATGAAACTCAAGTTTCTACTGCGGTACAAGGAACATTAGGATATTTGGATCCAGAGTACCTCCTTACAGGTCAATTAAATGAGAAAAGTGACGTATATAGCTTTGGGGTTGTGCTTTTAGAGCTAATAACTGGGAAGAAACCAGTTGAATTCCATAGGCTAGAACATAAAAATTTGGCAACATACTTTGCATCATCAATGGAAGAAGGTAGCTTGTTGGAGGTTCTTGACAAGCGAGTGCTGAATCAAAAGAATATAGAGCAGCTAAAGGAGGTTGCTTTATTAGCAAGAAGGTGCAATAAAGTTAATAGAGAGGAAAGGCCAACTATGAAAGAAGTAGCAACAGAATTAGAGGGTCTAATTGCTATGAAAAAGCATCCTTGGGTAAAAAGAGGGGATATGATGTCTGAAGAAAGTGAATGCTTGCTTGGTCATGCCGTTGCTAGCACCTCAGCTGGTTATGATGGTGGTGGATATGGGAATGTTAGTGCTAACACTTTTGCTGCTTATGAAAGCATACAGAAGCAAATGGCATTTGAGATTGCAGATGGGCGATGA 2088 0.4215 MGLLNALQSKLALLVTTTAAALVAAEAQTKPGCNYTCGNVSIPYPFGTSENCYRNENVNFFLNCTTTTSSSSSGEATTELIFGKNLPVHNISLDPPELTLPRPISKHCYNSNDYAYGNAMWFPKYSISNTKNRFIVVGCDTYAFIMDLNATFTTGCVSSCNNETRFEEAGACSGVGCCQTSFPGTIRDYNITLKSFNNYTMVRDFNPCGYAFIAKEGSFNFSYGELRNLSNRIEFPVVLDWTVSNHTCLEAQKNQTSYACKQNSTCKESGSSIGYYCVCADGFRGNPYLDTGCKGISVSLLVIFTTVFTLCWGNKQRALKQLRRQKYMLHQLHQQQRYTERTKLFTEDELKIATNDFNESRILGRGGQGTVYKGILPDNSLVAIKKSRVGGDSRQVNDFINEVTVLSQINHRNVVKLCGCCLEIEVPLLVYEFVNNGTLLDHIDPLKNEHSLSWEARLRIAAETAGAISYLHSSASIPIIHRDIKSNNILLDHNHIAKVSDFGASRLIPLDETQVSTAVQGTLGYLDPEYLLTGQLNEKSDVYSFGVVLLELITGKKPVEFHRLEHKNLATYFASSMEEGSLLEVLDKRVLNQKNIEQLKEVALLARRCNKVNREERPTMKEVATELEGLIAMKKHPWVKRGDMMSEESECLLGHAVASTSAGYDGGGYGNVSANTFAAYESIQKQMAFEIADGR 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1010 695 FunFam Wall-associated receptor kinase 2 327 433 - -
Acco04g1010 695 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 630 IPR045274 GO:0007166
Acco04g1010 695 SUPERFAMILY Protein kinase-like (PK-like) 340 631 IPR011009 -
Acco04g1010 695 Gene3D Transferase(Phosphotransferase) domain 1 434 648 - -
Acco04g1010 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Acco04g1010 695 Pfam Protein tyrosine and serine/threonine kinase 360 627 IPR001245 GO:0004672|GO:0006468
Acco04g1010 695 Gene3D Phosphorylase Kinase; domain 1 317 433 - -
Acco04g1010 695 Pfam Wall-associated receptor kinase galacturonan-binding 33 95 IPR025287 GO:0030247
Acco04g1010 695 SMART serkin_6 357 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1010 695 CDD STKc_IRAK 363 630 - -
Acco04g1010 695 ProSiteProfiles Protein kinase domain profile. 357 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1010 695 FunFam Wall-associated receptor kinase 2 434 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1010 Acco-ChrAcco04 9328681 9332303 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1010 25 695 Receptor kinase-like Gene Family AT1G21230 41.074 2.41e-166 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Acco04g1010 PK_Tyr_Ser-Thr 1.6e-48 CL0016