Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1006 ATGAGCTTTGGGGACGCAGGGGCATGCTCTGGTGTGGGATGTTGCCAGACCAGTTTCCCCAAAATCATAAAGGACTATAAGGTCAGATTAGGGTGGTTTAACATTGACAAGAAGAAGCGTGACTCCAATGCTTGCGGCTATGCGTTTTTTGCGAAGAAAGGATCCTTCAACTCCTCAAAACTCGAGCTGCGTGATCTCAGCAACAAAACACAATTTCCCATGGTTGTGGACTGGGCTGTTTCCAATCAGAAATGCCGTGAAGCCAAGAAAGATGCAAGGAGCTATGCCTGCAAGCAAAACAGTGAATGTAAAGACTCACCAAGTGGTATTGGGTACTATTGCGTATGTAAAAAAGGTTTCAGAGGCAATCCCTATCTCGATTTCGGCTGCAAAGATATTAATGAGTGCGATGGGGAGAATTATTGCAGTAGGAGATGCCACAACTTCGATGGGTCTTACAAGTGTTCTTGTCCATGGGGTTATAGAGGCGATGGCTATAAAGTCGGATTAGGCTGCAAGTTCGCAATTAAAGAAATTTCATTGGGGATTTTTGTAGGCTTGCTTGTTATCTTTACAATAGTCGTCACATTATGCTGGGGAAAAAACAAGCAAAGAGCAGTCGAGCAACTTAAAAGACAAAAGTATATGCTGCATCAACTTCATCAGCAACAAAGATACACTGAAAGAACCAAACTTTTTACTGAAGACGAGCTCAAAATTGCCACAAACAACTTTAATGAGAGGAGAATTCTTGGTCGAGGAGGACAAGGCACAGTTTACAAGGGCATATTATCAGATAACTCGCTTGTTGCCATTAAAAAGTCCAGAGTTGGAGGTGACTCAAGACAAGTTAATGATTTTATCAATGAAGTGACTGTACTTTCCCAAATCAACCACAGGAACGTGGTTAAACTTCTTGGGTGTTGTCTTGAAACTAAAGTTCCCTTATTGGTTTATGAGTTCGTGGACAATGACACCCTTCTTGACCATATAGACCCACTAAAGAATGAGCATTCTCTTTCATGGGAGGCTCGATTAAGGATAGCTGCAGAAATAGCTGGGGCCATTTCATATTTACACTCGTCTGCTTCCATCCCAATTATTCATCGTGATATTAAATCTGCCAACATACTATTAGACCACAATCACATAGCAAAAGTTTCTGACTTTGGAGCTTCAAGACTTATTCCTCTTGATGAAACTCAAGTTTCTACTGCGGTGCAAGGAACATTAGGATATTTGGATCCAGAGTACCTCCTTACAAGTCAATTGAATGAGAGAAGTGACGTATATAGCTTTGGGGTTGTGCTTCTGGAGCTAATAACTGGGAAGAAAGAAGTTGAGTTCCGTAGGCTAGAACATAAAAATTTGGCAACATACTTTGCATCATCAATGGAAGAAGGTAGGTTCTTGGAGGTTCTTGACAAGCGAGTGTTGAATCAGACGAATGTAGAGCAGCTAAAGGAGGTTGCTTTCTTAGCAAGAAGGTGCATTAGAGTGAATAGAGAGGAAAGACCAACTATGAAAGAAGTAGCAACAGAATTAGAGGGTCTAATTGCTATGAAAAAACATTATTGGGTAACAGGAGGGGATACGATGTCTGAAGAAAGTGAATGCTTACTTGGTCATGCTGTTGCTAGCAATTCAGTTGGTTATGATAGTGTATATGGGAATGTTAATGCTAACACTTTTGCTGCTAATGCAAGCATACAGAAGCAAATGGCATTTGAGATTGCAAATGGGCGATGA 1749 0.4111 MSFGDAGACSGVGCCQTSFPKIIKDYKVRLGWFNIDKKKRDSNACGYAFFAKKGSFNSSKLELRDLSNKTQFPMVVDWAVSNQKCREAKKDARSYACKQNSECKDSPSGIGYYCVCKKGFRGNPYLDFGCKDINECDGENYCSRRCHNFDGSYKCSCPWGYRGDGYKVGLGCKFAIKEISLGIFVGLLVIFTIVVTLCWGKNKQRAVEQLKRQKYMLHQLHQQQRYTERTKLFTEDELKIATNNFNERRILGRGGQGTVYKGILSDNSLVAIKKSRVGGDSRQVNDFINEVTVLSQINHRNVVKLLGCCLETKVPLLVYEFVDNDTLLDHIDPLKNEHSLSWEARLRIAAEIAGAISYLHSSASIPIIHRDIKSANILLDHNHIAKVSDFGASRLIPLDETQVSTAVQGTLGYLDPEYLLTSQLNERSDVYSFGVVLLELITGKKEVEFRRLEHKNLATYFASSMEEGRFLEVLDKRVLNQTNVEQLKEVAFLARRCIRVNREERPTMKEVATELEGLIAMKKHYWVTGGDTMSEESECLLGHAVASNSVGYDSVYGNVNANTFAANASIQKQMAFEIANGR 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1006 582 Pfam Protein tyrosine and serine/threonine kinase 248 515 IPR001245 GO:0004672|GO:0006468
Acco04g1006 582 ProSiteProfiles EGF-like domain profile. 132 164 IPR000742 -
Acco04g1006 582 SMART serkin_6 245 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1006 582 FunFam Wall-associated receptor kinase 2 322 538 - -
Acco04g1006 582 FunFam Fibrillin 2 131 169 - -
Acco04g1006 582 SMART egf_5 84 131 IPR000742 -
Acco04g1006 582 SMART egf_5 135 173 IPR000742 -
Acco04g1006 582 Gene3D Laminin 135 167 - -
Acco04g1006 582 Gene3D Laminin 83 134 - -
Acco04g1006 582 Gene3D Phosphorylase Kinase; domain 1 215 321 - -
Acco04g1006 582 FunFam Wall-associated receptor kinase 2 83 130 - -
Acco04g1006 582 ProSitePatterns Calcium-binding EGF-like domain signature. 132 155 IPR018097 GO:0005509
Acco04g1006 582 SUPERFAMILY Protein kinase-like (PK-like) 228 516 IPR011009 -
Acco04g1006 582 FunFam Wall-associated receptor kinase 2 215 321 - -
Acco04g1006 582 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 146 157 IPR000152 -
Acco04g1006 582 SMART egfca_6 132 173 IPR001881 GO:0005509
Acco04g1006 582 CDD STKc_IRAK 251 518 - -
Acco04g1006 582 Gene3D Transferase(Phosphotransferase) domain 1 322 532 - -
Acco04g1006 582 Pfam Calcium-binding EGF domain 132 162 IPR001881 GO:0005509
Acco04g1006 582 SUPERFAMILY EGF/Laminin 132 165 - -
Acco04g1006 582 ProSiteProfiles Protein kinase domain profile. 245 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1006 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 367 379 IPR008271 GO:0004672|GO:0006468
Acco04g1006 582 CDD EGF_CA 132 164 - -
Acco04g1006 582 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 9 518 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1006 Acco-ChrAcco04 9239352 9242485 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1006 9 555 Receptor kinase-like Gene Family AT1G21230 49.132 1.58e-173 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Acco04g1006 PK_Tyr_Ser-Thr 3.1e-48 CL0016