Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1004 ATGAAGCTTGTTGATCTGAAAAATGCTTTTCATTTGAAACTGGTATTGTTTATCTGCACGTTGGCCCAAACCACAGCTGCAATTTGCAACAACTCATGTGGGAACTTGAGCATCCCATATCCCTTTGGCACTTCCAGTAACTGCTATATCGATGAAAGGTTCTTCATCAACTGCACAACAACAACCACCAATTCTTCTTCGTCTTCATCTTCATCTGCACAACCAATAGCTTATCTGAGAGGTGGTGATATACCAGTTCTCAACATATCCTTGGACCCTCCTGAATTGACCATCTTGGCAGAGGTTTCTAAGCAGTGCTATAATTCTGGTTTTAGTGCTTCGTGGAATGAAATTTGGTTTGAGAAGTTCTCTATATCAAACACGAAGAACAGATTCACTGTGGTGGGCTGTGACACCTCTGCTTATATCAGAGACTTGACTGGAAACAGGTTTCAAACTGGGTGTACTTTGAATTGCAATAACAATAGCTTTGAGGATTGGTCATGTTCTGGTGTGGGATGTTGCCAGACAAATTTCCCTAGAGCCATAAGGAATTATACTATCAACATAACTACTTTTGACAACTATAGGTATGTCAGAGAGTTCAACCCTTGTGGCTATGCTTTTATTGCCCAGGATGGATCCTTCAATTTCTCAGCTCGAGAGCTACTTGATCTCGGCAACAGAACGCAATTTCCTGTGGTTCTGGATTGGGCTGTTGGCGATCAGACATGTGTTGAAGCACAGAGAAATGGAAGCAGCTATGCCTGCAAGAACAACACCAGATGCCTAGAGTCAGTAACTGGTATTGGCTACCAGTGCCTTTGTGAAGATGGCTTCAAAGGCAACCCCTACCTCTCTCACCCTCAGTATGGCTGCAAAGATATTAATGAGTGCGAGGGAGGGAATCGATGTAGTAGGAGATGTCACAATGTGGAAGGAAATTATACATGTTCTTGTCCCCGGGGATATAAAGGCGACGGCTATAAAGATGGATCAGGCTGCAAATTCCCTGTCATGGAAATTTCATTAGGCATTTCTGTAGGCTTGCTTGTTGTCTTCACATTGGTCTCCACATTATGTTGGGGACACAAGCAAAGAGCACTAAAACAACTTAGAAGACAGTATTTTGAACAAAATGGAGGTAATTATATGCTACAACAACTTTATCAACAACAAGCACACACTAATAGAACCAAGATTTTTACTGAATATGAGCTCAAAATTGCCACAAACAACTTTGATGAGAGTAGAATACTTGGCCATGGGGGACAAGGCACAGTTTACAAGGGTCTATTACCAGATAACACGCAGGTTGCCATAAAAAAGTCCAGAGTAGGTGGAGATCCCAGACAAATTAAAGATTTTATCAATGAAGTGGTCGTACTTTCCCAAATCAACCATAGAAATGTGGTGAAACTTTTTGGGTGTTGTCTTGAAACTGAAGTTCCTTTGTTAGTTTATGAATTTGTGGACAATGGCACTCTTCTTGATCATATAGACCCATTAAAGAATGAACACTTTCTTTCATGGGAGACTCGATTAAGGATAGCTGCAGAAACAGCAGAGGCCATTTCATACTTACACTTTTCTACTTCTATTCCAATTATTCATCGCGATATAAAATCTGCCAACATATTATTAGATCACACTCATAGAGCAAAAGTTTCTGACTTCGGAGCTTCAAGACTTGTTCCTCTCGATGAAACTCAAGTTACCACTATGGTTCAAGGGACATGGGGATATTTGGATCCAGAGTACCTCCTTACAGGTCAATTGAATGAGAAAAGTGATGTTTATAGCTTTGGAGTTGTGCTTGTGGAGCTAATTACTGGGAATAAAGCAGTTGAATTCAATAGGCCAGAAGAACAAAGAAATTTGGCTATGTACTTTGCATCTTCAATGAAAGAAGACAACTTGTGGGAGATTCTTGATAAGCGAGTGTTGGATCAAAAGAATGCTGAGCAAGTAAAGGAAGTGGGTTTCTTAGCGAGAAAGTGCATTAGAGTTAACAGAGAGGAAAGACCAACTATGAAAGAGGTAGCAATGGAATTAGAGGGTCTAATTGCTATGAAGAAACATCCTTGGGGAAAGGGAGAGAAGATGATGTCTGAAGAATGTGAATACTTACTAGATCATGTAGCTAAAAGATATGGGAATGCCGGTGCTAGCAGTTCAGCTGCCTATGATAGCTTACAAAAACAAATAGCATTTGAGATTGAAGATGGGAGATGA 2235 0.4054 MKLVDLKNAFHLKLVLFICTLAQTTAAICNNSCGNLSIPYPFGTSSNCYIDERFFINCTTTTTNSSSSSSSSAQPIAYLRGGDIPVLNISLDPPELTILAEVSKQCYNSGFSASWNEIWFEKFSISNTKNRFTVVGCDTSAYIRDLTGNRFQTGCTLNCNNNSFEDWSCSGVGCCQTNFPRAIRNYTINITTFDNYRYVREFNPCGYAFIAQDGSFNFSARELLDLGNRTQFPVVLDWAVGDQTCVEAQRNGSSYACKNNTRCLESVTGIGYQCLCEDGFKGNPYLSHPQYGCKDINECEGGNRCSRRCHNVEGNYTCSCPRGYKGDGYKDGSGCKFPVMEISLGISVGLLVVFTLVSTLCWGHKQRALKQLRRQYFEQNGGNYMLQQLYQQQAHTNRTKIFTEYELKIATNNFDESRILGHGGQGTVYKGLLPDNTQVAIKKSRVGGDPRQIKDFINEVVVLSQINHRNVVKLFGCCLETEVPLLVYEFVDNGTLLDHIDPLKNEHFLSWETRLRIAAETAEAISYLHFSTSIPIIHRDIKSANILLDHTHRAKVSDFGASRLVPLDETQVTTMVQGTWGYLDPEYLLTGQLNEKSDVYSFGVVLVELITGNKAVEFNRPEEQRNLAMYFASSMKEDNLWEILDKRVLDQKNAEQVKEVGFLARKCIRVNREERPTMKEVAMELEGLIAMKKHPWGKGEKMMSEECEYLLDHVAKRYGNAGASSSAAYDSLQKQIAFEIEDGR 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1004 744 ProSitePatterns Calcium-binding EGF-like domain signature. 295 318 IPR018097 GO:0005509
Acco04g1004 744 Gene3D Laminin 243 329 - -
Acco04g1004 744 SUPERFAMILY EGF/Laminin 295 328 - -
Acco04g1004 744 FunFam Wall-associated receptor kinase 2 491 708 - -
Acco04g1004 744 Gene3D Transferase(Phosphotransferase) domain 1 491 706 - -
Acco04g1004 744 FunFam Low-density lipoprotein receptor isoform 1 245 337 - -
Acco04g1004 744 SUPERFAMILY Protein kinase-like (PK-like) 394 685 IPR011009 -
Acco04g1004 744 FunFam Wall-associated receptor kinase 2 384 490 - -
Acco04g1004 744 Pfam Wall-associated kinase 167 277 IPR013695 GO:0004674|GO:0016020
Acco04g1004 744 SMART serkin_6 414 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1004 744 SMART egf_5 244 294 IPR000742 -
Acco04g1004 744 SMART egf_5 298 336 IPR000742 -
Acco04g1004 744 CDD STKc_IRAK 420 688 - -
Acco04g1004 744 Gene3D Phosphorylase Kinase; domain 1 384 490 - -
Acco04g1004 744 SMART egfca_6 295 336 IPR001881 GO:0005509
Acco04g1004 744 CDD EGF_CA 295 327 - -
Acco04g1004 744 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 24 689 IPR045274 GO:0007166
Acco04g1004 744 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 309 320 IPR000152 -
Acco04g1004 744 ProSiteProfiles Protein kinase domain profile. 414 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1004 744 ProSiteProfiles EGF-like domain profile. 295 327 IPR000742 -
Acco04g1004 744 Pfam Wall-associated receptor kinase galacturonan-binding 29 92 IPR025287 GO:0030247
Acco04g1004 744 Pfam Protein kinase domain 415 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1004 744 ProSitePatterns Serine/Threonine protein kinases active-site signature. 536 548 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1004 Acco-ChrAcco04 9217487 9220632 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1004 29 744 Receptor kinase-like Gene Family AT1G21230 45.652 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Acco04g1004 Pkinase 2.8e-47 CL0016