Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1003 ATGGTGACAGAGGTATATTGGCGAATCTGGAGTGTCCAAGAACGAGTTTTGAAGGCTGCTAAGATTAGTTTTGCAGATATTAATGAGTGCGAGGAAAAGAATCGTTGCAGTAGGCATTATAAGTGTTCATGTCCGTGGGGTTATAGAGAAGATGAGCTCAAAATTGCCACAAACAACTTTGATGAAAGCAAAATCCTTGATCGTGGAGGACAAGTCATGGTTTACAAGGGTATATTATCAGATAACACGCATGCTGCCATCAAAAAGTCTAGAATAGGAGGGGTTCTGAGACAAATTAAGGATTTTATTAATGAAGTGGTTGTACTTTCCCAAATCAACCATAGAAATGTGGTGAAACTTTTTGAGTGTTGTCTTGAAACTGATATTCCCTTGGAAATTAGGATATTTGGATCCAGAGTATCTCCTTACAAGGCAACTTTACTAAATGAGAAAAGTGACGTATATAACTTTGGGGTTGTGCTTCTGGAGCTAATGACCGTGAAGAAACCACTTGAATTCCATAGGCTAGAACAGAAAAATTTGGCAATATACTTTGCGCCATCAATGGAAGAAGGTAGCTTGTTGGAGGTTCTTGACAACACTTCAGCTGGTTGTGACGGTGGATATGGGAATGTTGGTGCTAACCCTTATGCTGCTTATGAGAGCATACAGAAGCAAATGGCATTTGAGATTGCAGATGGCCGATGA 708 0.3997 MVTEVYWRIWSVQERVLKAAKISFADINECEEKNRCSRHYKCSCPWGYREDELKIATNNFDESKILDRGGQVMVYKGILSDNTHAAIKKSRIGGVLRQIKDFINEVVVLSQINHRNVVKLFECCLETDIPLEIRIFGSRVSPYKATLLNEKSDVYNFGVVLLELMTVKKPLEFHRLEQKNLAIYFAPSMEEGSLLEVLDNTSAGCDGGYGNVGANPYAAYESIQKQMAFEIADGR 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1003 235 Pfam Protein tyrosine and serine/threonine kinase 64 127 IPR001245 GO:0004672|GO:0006468
Acco04g1003 235 Gene3D Transferase(Phosphotransferase) domain 1 135 228 - -
Acco04g1003 235 Gene3D Phosphorylase Kinase; domain 1 18 133 - -
Acco04g1003 235 CDD EGF_CA 26 49 - -
Acco04g1003 235 SUPERFAMILY Protein kinase-like (PK-like) 48 181 IPR011009 -
Acco04g1003 235 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 147 201 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1003 Acco-ChrAcco04 9213212 9215874 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1003 143 198 Receptor kinase-like Gene Family AT1G21250 50.877 2.47e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Acco04g1003 PK_Tyr_Ser-Thr 3e-05 CL0016