Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0986 ATGTTTAATTCCCAGTGCCTCAAGGTCCTTCTTATAAGAACATCACCAACCTTACGATGCTTTCGTCTATTGCAACAACACTACCCTTCACCCACATTCTCTCTCAAATACAGCACAAGTGCTTCTCCAGGTGATCACTCGTTTACTGTATCGTATCTCACTAACAGTTTAGGGTTTTCCCTAGAAGCTGCTTTTAATGCTTCCAAGAAAGTTCGATTTGACACCTCACAAAGGCCAGATTCAGTTGTGAGCTTCTTTGAGAGCCACGGTTTCTCTAAGTCTATCATGAAAGATGTCTTCAGAAAGGATCCATGGCTTCTTTTGTGCGATCCCCAACATAGTATTTTGCCCAAGTTTGAATTTTTCCTCTCAAAAGGTGCAACTACCTCCGACCTTAACTTCATGGTGCGAAGGACCCCTAGATTCCTGTTGAGAAGCTTAGAGAATCACATAATCCCATCATATGAAATGCTAAAAGGGTTTCTTCAGGACGATAAAACCACCATTTCAAGTATAAAAGGCTATCCAGATATGCTTTATGACTCTCGAGCAATACAAAGTATTAACTTGTTGCTAGAGAATGGAATGTCAAGGACAACCGTTGCTCTTATACTTAGAAGGAGGCCTCGTACACTGCACTCCCCTAATGTCCTTATAAAGGCGGTAGAGGAAGCTAAGTGTTTGGGATTTAATCCTTTGTGCACAACATTTAGTGTTGCATTGATAGCTAAAACGCTTTTGAGTAAGTCCCTCTGGGACGCCAAAGTTGATATCTACAAGAGATGGGGATGGTCAGAAGAAACATTATTAGAAGCATTTAGGAAGCAACCACACTGTATGTTAGCATCAAGGGATAAGATTAATGCGGTGATGAGTTTGTGGGTTAACCAGTTGGGTTGGAATTCTTTGCTCCTTGTCAAGGATCCGAATATGTTTCTATACAGCTTTGAGAGAAGGATTATCCCGAGGGCTTCAGTGTTACATTTTCTTCAGTCAAAAGGGTTGATAAAAAAGAATGCTAGCTTAGTTGTGCCATTTGGTTTGACTGAAAGGAAGTTCCTGGAAAGATTTGTGGAAAGTTTTGAGGAGCATAATCATCGTCTATTGAAGCTATATGAAAAAAATTGA 1128 0.4043 MFNSQCLKVLLIRTSPTLRCFRLLQQHYPSPTFSLKYSTSASPGDHSFTVSYLTNSLGFSLEAAFNASKKVRFDTSQRPDSVVSFFESHGFSKSIMKDVFRKDPWLLLCDPQHSILPKFEFFLSKGATTSDLNFMVRRTPRFLLRSLENHIIPSYEMLKGFLQDDKTTISSIKGYPDMLYDSRAIQSINLLLENGMSRTTVALILRRRPRTLHSPNVLIKAVEEAKCLGFNPLCTTFSVALIAKTLLSKSLWDAKVDIYKRWGWSEETLLEAFRKQPHCMLASRDKINAVMSLWVNQLGWNSLLLVKDPNMFLYSFERRIIPRASVLHFLQSKGLIKKNASLVVPFGLTERKFLERFVESFEEHNHRLLKLYEKN 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0986 375 Gene3D Transcription termination factor 3, mitochondrial 172 370 IPR038538 -
Acco04g0986 375 PANTHER CGI-12 PROTEIN-RELATED 46 360 IPR003690 GO:0003690|GO:0006355
Acco04g0986 375 Pfam mTERF 83 289 IPR003690 GO:0003690|GO:0006355
Acco04g0986 375 Pfam mTERF 186 353 IPR003690 GO:0003690|GO:0006355
Acco04g0986 375 FunFam Mitochondrial transcription termination factor-like 147 365 - -
Acco04g0986 375 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Acco04g0986 375 SMART mt_12 302 336 IPR003690 GO:0003690|GO:0006355
Acco04g0986 375 SMART mt_12 202 231 IPR003690 GO:0003690|GO:0006355
Acco04g0986 375 SMART mt_12 97 128 IPR003690 GO:0003690|GO:0006355
Acco04g0986 375 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0986 Acco-ChrAcco04 9008257 9009384 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Acco04g0986 mTERF 1.6e-20 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g0986 04 9008257 9009384 Acco04g0986 04 9008257 9009384 ECH