LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco04g0970	ATGGAGGATTCCGTAGGACAAAAGAGGAACAGTCGTGAGTTCACTTTGGTATCAGTTGCTGAGCTCTCTTTGCCTGCCTCTGCTTCGCCGGGTATTGCTCGCTTTACTTCCGATGGTTCCGCGGCCCAGCTGCAAATTCATCAAGATTCTCATCAGATTGATATCCATGTTGATCTTAGAACTGCTCAGATATTCAAATTAGGTCCTGTTCAATCAATTTGCATGGTCGAAGGGTCTGTTGTTCATAACCAGACATCATTCTCAAGGGGAATATCTATCCAGTTTAGAAATGAGGAGGAAAGTGGGGCCTTTCATAGTGTATTCCAGCAATGGAAGAAGGAAGGGAATGCTCAAGATTCAGGTAGAAACTTACCAAATGGAATTATACCAAGTTCTAAAAGTAAATTTGATGAGAAGATAGAGGAATCTTCTGCAAAAATGTATTTCCATTACTATGGTCAGCTTGTGCATCAGCAAAATATGTTGCAAGACTATGTTAGAACTGGAACTTATTATGCTGCAGTTATTGAGAACCGTGCTGATTTCATGGGCCGTGTGGTGGTTGATGTTGGTGCTGGTAGTGGTATCTTGTCCTTATTTGCTGCTCAGGCTGGTGCAAAACATGTTTATGCGGTTGAGGCATCTGAAATGGCAGAATATGCACGGAAACTTATAGCTGGAAACCCAATGCTCGGTCAACGAATTACAGTGATCAAGGGCAAGGTTGAGGATGTAGAATTGCCGGAGAAAGCAGATATTTTGATCTCTGAGCCCATGGGAACCTTGTTAATAAATGAAAGGATGTTGGAGTCTTATGTCATTGCTAGAGATAGGTTTCTCACTCCTAAGGGGCAAATGTTTCCCACTGTGGGAAGGATTCACATGGCACCATTCACTGATGAATATCTGTTTATTGAAATGGCTAATAAGGCCTTGTTTTGGCAGCAACAAAACTATTATGGTGTTGATTTGACACCCTTGTATGGAACTGCATTTCAAGGATACTTTTCTCAGCCTGTGGTGGATGCTTTTGATCCAAGATTGTTAATAGCTCCTCCTATGTTTCATGTGATAGACTTCACAAAAGTAAAGGAAGAAGAACTTTATGAAATAGATATACCTTTAAAATTCACAGCCTCTGTGGGTGCACGAGTTCATGGGCTTGCTTGTTGGTTTGATGTACTGTTTAATGGAAGTACCGTGCAAAGGTGGCTTACAACTGCCCCTGGGTCACCGACAACCCACTGGTACCAGATGCGCTGTGTTCTCTCTCAGCCAATTTATGTCATGGCGGGCCAAGAAATTACTGGCAGACTCCACATGGTTGCTCACAATGCCCAGAGCTATACAATATATTTGACACTGTCAGCTAAAATGTGGGGCCCTGGTGCTGAACAAGGAGGGATTCTTCAAACCTCATCGTGCAAACTTGATTTGAAAGAACCCTACTATAGAATGTCACAACCACAAGCTTATACTTTAGCCCAAGACCAGCAACAACCACCACTCCTACCCACACAGGACATACCAATTCAATCACAAGATTTAGATGAACCTGAAATGATGCAAGAGCCGTCGCCTAATTCATGTGCTCAGGTTAATTCATTGATGCAGAATATTTAA	1623	0.4245	MEDSVGQKRNSREFTLVSVAELSLPASASPGIARFTSDGSAAQLQIHQDSHQIDIHVDLRTAQIFKLGPVQSICMVEGSVVHNQTSFSRGISIQFRNEEESGAFHSVFQQWKKEGNAQDSGRNLPNGIIPSSKSKFDEKIEESSAKMYFHYYGQLVHQQNMLQDYVRTGTYYAAVIENRADFMGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPMLGQRITVIKGKVEDVELPEKADILISEPMGTLLINERMLESYVIARDRFLTPKGQMFPTVGRIHMAPFTDEYLFIEMANKALFWQQQNYYGVDLTPLYGTAFQGYFSQPVVDAFDPRLLIAPPMFHVIDFTKVKEEELYEIDIPLKFTASVGARVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQMRCVLSQPIYVMAGQEITGRLHMVAHNAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYTLAQDQQQPPLLPTQDIPIQSQDLDEPEMMQEPSPNSCAQVNSLMQNI	540

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco04g0970	540	Pfam	Ribosomal protein L11 methyltransferase (PrmA)	184	257	-	-
	Acco04g0970	540	Gene3D	Vaccinia Virus protein VP39	129	288	IPR029063	-
	Acco04g0970	540	Gene3D	-	290	498	-	-
	Acco04g0970	540	MobiDBLite	consensus disorder prediction	525	540	-	-
	Acco04g0970	540	ProSiteProfiles	SAM-dependent methyltransferase PRMT-type domain profile.	141	456	IPR025799	GO:0016274\|GO:0018216
	Acco04g0970	540	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	151	462	IPR029063	-
	Acco04g0970	540	FunFam	Probable histone-arginine methyltransferase CARM1	128	288	-	-
	Acco04g0970	540	FunFam	Probable histone-arginine methyltransferase CARM1	290	498	-	-
	Acco04g0970	540	MobiDBLite	consensus disorder prediction	517	540	-	-
	Acco04g0970	540	CDD	AdoMet_MTases	187	258	-	-
	Acco04g0970	540	PANTHER	PROTEIN ARGININE N-METHYLTRANSFERASE	103	471	IPR025799	GO:0016274\|GO:0018216

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco04g0970	Acco-ChrAcco04	8851855	8859052	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco04g0970	148	437	C2H2 Transcription Factor Family	AT3G12270	33.442	1.05e-38	147