Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0961 ATGGACGGTAATAAGGATGAAGCTTTGAGGTGTATTCGCATTGCTGAGGAGGCGATTGCAACAGGGAACAAAGAGCGTGCACTTAAATTTATCAAAATTGCACAACGGATGAATAACAATCTGTCTGTGGATGAGCTACTTATCATGTGTGAGAGGCTTGGTTCTCAATCATCTACGCCTTCTGAGGATGAAAACGGTGTCCATCAGGCTAAGAGGGAGCATGGTTCAAGACGAAGTGAGAATGGATTAAATGGAGAGAGAAATTATACAGAAGAACATGTTCGGTTGATTAGGGAGATCAAGGGAAAGAACGATTATTATGCCATTCTTGGTGTTGAGAAGGCTTGTTCTGTTGAGGAGATTAGGCGGGCTTATAGGAAATTGTCATTGAAAGTTCATCCTGACAAGAATAAGGCACCGGGTTCTGAAGAGGCATTTAAGAAGGGCTGGTGGAGGATTTTGAATACAACCAGCAGCACAATTTTAGGCGCAGGAGAGGAAGGACAACCACACATGACTTCTTTAACGATGACATTGATCCTTACGAGATGTTCAGGGCATTCTTTGGTGATGCCGGTGTATTTGGGAGAGCTCAAGTTTATCGGACAAGGGGAATGGGTGTTCCCCAGCGGCAAGAATTTCAAGGCGGAGGACTCAATATTATGCTCCTTATGCAAGTTGTACCGTTCTTGA 693 0.4401 MDGNKDEALRCIRIAEEAIATGNKERALKFIKIAQRMNNNLSVDELLIMCERLGSQSSTPSEDENGVHQAKREHGSRRSENGLNGERNYTEEHVRLIREIKGKNDYYAILGVEKACSVEEIRRAYRKLSLKVHPDKNKAPGSEEAFKKGWWRILNTTSSTILGAGEEGQPHMTSLTMTLILTRCSGHSLVMPVYLGELKFIGQGEWVFPSGKNFKAEDSILCSLCKLYRS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0961 230 SMART dnaj_3 104 159 IPR001623 -
Acco04g0961 230 MobiDBLite consensus disorder prediction 55 87 - -
Acco04g0961 230 PRINTS DnaJ domain signature 125 140 IPR001623 -
Acco04g0961 230 PRINTS DnaJ domain signature 107 125 IPR001623 -
Acco04g0961 230 SUPERFAMILY Chaperone J-domain 82 147 IPR036869 -
Acco04g0961 230 PANTHER AT29763P-RELATED 1 148 - -
Acco04g0961 230 Pfam DnaJ domain 105 148 IPR001623 -
Acco04g0961 230 ProSiteProfiles dnaJ domain profile. 105 167 IPR001623 -
Acco04g0961 230 MobiDBLite consensus disorder prediction 65 87 - -
Acco04g0961 230 CDD DnaJ 105 148 IPR001623 -
Acco04g0961 230 Gene3D DnaJ domain 79 157 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0961 Acco-ChrAcco04 8768392 8769145 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0961 100 158 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.846 4.59e-06 45.1