Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0947 ATGGCTACCAATGACGAGTCCAATCTCAATGCCTTCGACGCCAATAATGGCTATACATCCACCACCAACATCCTCCTCACCGTCACCTTCGTCTTGCTCTTCCTCGTCATCCTCCTCATTTCCCTCCACTTCTTCGTCCATTGGTACCTCCGCCGTGCTCGCCGCATGCGCCGCCGTTCATACCTCGTCTTCTACGTCGATTCCGATGCCACCCCACCTACCGGTCTCGACCCTTCTGTCATTCAGTCTCTCCCTGTCTTCGTTTATACCGCCGACTCCGACCCCGTGGATTGCGCCGTGTGCTTGTCCGATTTCGAAGATAACGAATCGGGTCGAGTTTTGCCCAAATGCAACCACACTTTTCACGTCGAATGCATCGACATGTGGTTCCAGTCCCACTCAACTTGCCCGCTGTGTAGATCTTTGGTTGAGCCTGTCGTCCCGCCCGGGGACCGACCTGGACCGGAAGTGGTGATCGATGTGTGCGAACCGGGTTCGAGTTCAGGGTGTCAGCAGGCTGGAGGAGAAGAGAACCGAAGTGGCCGGAAGCTCTGTTCTTCGTCGTCTTCGATTGCGTTGAGGCGAAAGCCGTCGTCCGTGGGTGTGGCAATTGACGTGCCGTTGAGTAGAAGCTTCGGGAGAGAGGCGGAGGGGTCGACAACGTCGTTTAGGTCACCGGGGAGTCGTTTGCTATCGTTCAAGAGAATACTGAGCAGAGAGAGGAAGTTAAGCCCTTCGTCCCCATCGTCGGAAATCTGTGCCGTTGGATGCAGCTCCGTCCGTGACCGAGATAGAGACGAGTCAATGAGTTGA 813 0.5572 MATNDESNLNAFDANNGYTSTTNILLTVTFVLLFLVILLISLHFFVHWYLRRARRMRRRSYLVFYVDSDATPPTGLDPSVIQSLPVFVYTADSDPVDCAVCLSDFEDNESGRVLPKCNHTFHVECIDMWFQSHSTCPLCRSLVEPVVPPGDRPGPEVVIDVCEPGSSSGCQQAGGEENRSGRKLCSSSSSIALRRKPSSVGVAIDVPLSRSFGREAEGSTTSFRSPGSRLLSFKRILSRERKLSPSSPSSEICAVGCSSVRDRDRDESMS 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0947 270 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 145 IPR013083 -
Acco04g0947 270 SUPERFAMILY RING/U-box 84 146 - -
Acco04g0947 270 SMART ring_2 98 139 IPR001841 -
Acco04g0947 270 CDD RING-H2_EL5-like 97 140 - -
Acco04g0947 270 ProSiteProfiles Zinc finger RING-type profile. 98 140 IPR001841 -
Acco04g0947 270 FunFam RING-H2 finger protein ATL3 67 145 - -
Acco04g0947 270 Pfam Ring finger domain 97 140 IPR001841 -
Acco04g0947 270 MobiDBLite consensus disorder prediction 242 270 - -
Acco04g0947 270 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 18 143 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0947 Acco-ChrAcco04 8589891 8590703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0947 1 248 Rapid Response to Elicitors AT3G16720 43.007 9.41e-55 177
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g0947 04 8589891 8590703 Acco04g0947 04 8589891 8590703 ECH