Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0945 ATGAAGAATATAGCTGCTATTTTTGTATTTGGGGTGGCCATGGTGGCTGCCAATGAAGTTGCCTCCGCGAAGGAACACGGTGAAAAGAAACAGATTCTGTTGCCTCAAGTGGGCGTGGAAATGCTCTGTAGTTCAGCCCAATACAAAGAAACCTGCGAACACAGCCTCTCTTCAAAAGCAAACAATGGAACCGCGGACAGTAAAGAACTAGTGAAAACCGCCTTCGACGCGGCCACCAAGGAGTTCAAGAAGTTCATCGACAACTCCACTCTCTTCGAGGAGCTTGCCAAGGACAACATGACCAAACAAGCCATGAAAATCTGCCAAGAGGTGCTAGACTACGCCATCGACGACATTCAAAACTCAATCCATAGGGTGGACCAGTTCGACATAGGTAAGCTCGATGAATATGTCTATGACGTTAAGGTGTTTAACACCTCCCTCGAGCTTAGCATGAACGCTTTGAACATTATTTCTGGCCTCTCCGACATCGCCGAAACCTTCAAATTACCTGGATTCGCCAACATTCTGCAAACTTTTGGCAATGGCAACACCTCCGGTCAACAAGCTCATGGCAATGACAATACCTCCGGTAAGCAAACTCATGCCAATGACAATAGCTTGCATCGGAAGCTTCTCGAGAGCTTGCCGTCGTGGGTAAGTGATAGCCAACACCGTCACCTCCTGGCCACAGCCGCATCCGGAGCCGCCAAGGTTAAACACGATGTTGTTGTGGCTCAAGATGGAACCGGACAGTTTACAACACTCGCCGATGCTCTTAAAACTGTTCCAAAGAATAATACAAAACCCTATGTGATTTACGTGAAGGCCGACATATATAATGAGATTGTGAATATCACCAAGCAATCTAGTTACATCACTATCATCGGAGATGGTCCCACCCACACCAGATTGACCGGCAATCTTAGCTATGCCGATGGCGTCCAAACTTACAACACTGCAACATTTGGTGTGAATGCTCCTTACTTCACAGCCATGCATGTTGGGATTGAGAACTCAGCCGGAGCAATTAAGCGCGAAGCTGTGGCGCTCCGAGTAACAGCAGATAAAACCATCTTTTACAATTGCCAAATTGACGGGTACCAAGACACACTTTACGCGCAGTCCCACCGCCAGTTCTACCGGGACTGCGTTATCTCCGGAACAATCGACTTCATCTTCGGCGACGCGGTCATGGTCTTCCAGAATTGCACTTTGGTCGTCAGGCAACCTTTAAGCAACCAGAACTCCATCGCCTCCGCCAGTGGCCGTAGCGTGATCAACAGCCCTAGCGCCATGGTTTTCCAGAGCTGCCGCTTCACCGCCGACCAGCTCTACCTCTCTGACCCAGCGAAGAAACTGGCATACCTCGGACGGCCATGGAGGGCCTACGCCAAGGTGATCTCTGCTGCTAAAGCTGCAAATTTCTATCCGGGCATGTTCTATGAATTCAGGAATGCAACTAACTCAGAAGATGATTCATGGATCTCTGCCTCTGGGTTTCCTTACTCCGCTGGCCCCATGGCCATACCAAATTGA 1539 0.4925 MKNIAAIFVFGVAMVAANEVASAKEHGEKKQILLPQVGVEMLCSSAQYKETCEHSLSSKANNGTADSKELVKTAFDAATKEFKKFIDNSTLFEELAKDNMTKQAMKICQEVLDYAIDDIQNSIHRVDQFDIGKLDEYVYDVKVFNTSLELSMNALNIISGLSDIAETFKLPGFANILQTFGNGNTSGQQAHGNDNTSGKQTHANDNSLHRKLLESLPSWVSDSQHRHLLATAASGAAKVKHDVVVAQDGTGQFTTLADALKTVPKNNTKPYVIYVKADIYNEIVNITKQSSYITIIGDGPTHTRLTGNLSYADGVQTYNTATFGVNAPYFTAMHVGIENSAGAIKREAVALRVTADKTIFYNCQIDGYQDTLYAQSHRQFYRDCVISGTIDFIFGDAVMVFQNCTLVVRQPLSNQNSIASASGRSVINSPSAMVFQSCRFTADQLYLSDPAKKLAYLGRPWRAYAKVISAAKAANFYPGMFYEFRNATNSEDDSWISASGFPYSAGPMAIPN 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0945 512 ProSitePatterns Pectinesterase signature 2. 386 395 IPR033131 -
Acco04g0945 512 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 140 IPR035513 -
Acco04g0945 512 CDD PMEI-like_3 42 142 - -
Acco04g0945 512 FunFam Pectinesterase 4 239 474 - -
Acco04g0945 512 SUPERFAMILY Pectin lyase-like 239 504 IPR011050 -
Acco04g0945 512 MobiDBLite consensus disorder prediction 184 203 - -
Acco04g0945 512 PANTHER PECTINESTERASE 12 468 - -
Acco04g0945 512 Gene3D - 236 493 IPR012334 -
Acco04g0945 512 NCBIfam pectinesterase inhibitor domain 36 138 IPR006501 GO:0004857
Acco04g0945 512 Pfam Pectinesterase 242 469 IPR000070 GO:0030599|GO:0042545
Acco04g0945 512 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 149 IPR035513 -
Acco04g0945 512 SMART PMEI_2 34 180 IPR006501 GO:0004857
Acco04g0945 512 Pfam Plant invertase/pectin methylesterase inhibitor 39 141 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0945 Acco-ChrAcco04 8570276 8574006 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0945 4 468 Carbohydrate Esterase AT3G05610 37.751 1.69e-113 348