Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0943 ATGAATATGGGTAACGGTGAGCATGACAGAAAGAAGAAGATGGCTGTTATTTCGGTATCCGGGATCCTCCTGGTGGCCATGGTGGCCACCGTAGGCATCGGTCTATCCGGTGCCGGGGGCGGCGCAGCCACCGAGGATCAGAAGAAGCAGATCTCATCGTCTCAAAAGAACGTGGAAATGCTCTGCAGTTCAGCCCAATACAAAGAAACCTGCGAACACAGCCTCTCAAAAGCACACAATAATGGCACCACGGACATTAAAGAACTCATCAAAATCGCCTTCCACGCGGCGGCCAAGGAGTTCAAGAAGTTAATCAACAACTCCACCCTCTTCGAGGAGCTCGCCAAGGACAACATGACCAAACAGGCCATGGAAATCTGCCACGAGGTCCTAGACTACGCCATTGACGACGTTAGACACTCGATCGACAGCGTGGAACAATTTGATATAAGTAAGCTCGGTCAATACGCCTATGACGTAAAGGTGTGGCTCGGAGGCACTATCTCCCATCAACAGACCTGCTTGGACGGCTTCGAGAACACCACCACTCACGCCGCCGAGACCATGGCCAAGGTGTTGAACACCTCCCTCGAGCTGAGCATGAACGCTTTGGACATTATTTCTGGCCTCTCTGAGGTCGCCGACGCCTTCGGATTCGACACCATCTTGGGCAGCGCAGTGCAAGATAATGGCACTGTCAACACCACCCATGACCAAGCTCATCACGGCAATGAAAACACCTCCAGTCGGAAGCTTCTCCAGAGCTTGCCGTCGTGGGTAAGTGATAGCCACCACCGTCACCACCTGGCCAGAGCCGCAGCCGGTGCCGCCCACGTTAAGCCCGATGTTGTTGTGGCTCAAGATGGAACTGGGCAATTCACAACATTAACTGAGGCTCTTACAGCTGTTCCAAGAAACAATAGGAAACCCTATGTGATTTACGTGAAGGCCGGCATATATAACGAGATTGTCAAGATCCCCAAGCAATCCAGTTACATCACTATCATCGGAGATGGTCCCACCCGCACCAGATTCACCGGCAATCTCAACTATGCCGACGGTGTCCAAACTTACAACACCGCAACATTCGCCGTGAATGGTCCTTACTTCACAGCCATGCACGTAGGGTTCGAGAACTCAGCCGGAGCAATTAAGCACCAAGCCGTGGCCCTCCGAGTAACAGCAGATAAAGCTGTCTTCTACAACTGCCATATGGATGGATACCAAGACACACTTTATGCCCAGTCCCACCGCCAGTTCTACCGCGACTGCCTCATCTCCGGCACAATCGACTTCATCTTCGGCGACGCTGACATGGTCTTTCAGAACTGCGCTTTGGTTGTCAGGCAGCCTTTAAGCAACCAGAACTCCATCGTCTCCGCCAGTGGCCGCAACGTGATCAACAGCCCTAGCGCCATGGTGTTCCAGAGCTGCCGCTTCATCGGCGACGAGCTCTACCTCTCCGATGCGAAGAAGAAACCGGCATACCTCGGACGGCCATGGAGGGCCTATGCCAAGGTGGTTATCATGGATTCTCAGATCGACGGCATCTTCGCTCCCGAAGGTTACTTGTCATGGATGGGAAGCATCTATCACCTGACCTCCGTCTTCAATGAGTACAACAACAAAGGTCCCGGCGCCGATGCCTCTCACCGAGTGAAATGGCCCGGCGTGAAGACCATCACCGCTGTTCAAGCCGCAAATTTCTATCCTCGCAAGTTCTATGAATTCCACAACGCAACTACCTCTGATGATGATTCTTGGATCTCTGCCTCTGGGATTCCCTACTCCGCAGGCCCCATGTAA 1806 0.5305 MNMGNGEHDRKKKMAVISVSGILLVAMVATVGIGLSGAGGGAATEDQKKQISSSQKNVEMLCSSAQYKETCEHSLSKAHNNGTTDIKELIKIAFHAAAKEFKKLINNSTLFEELAKDNMTKQAMEICHEVLDYAIDDVRHSIDSVEQFDISKLGQYAYDVKVWLGGTISHQQTCLDGFENTTTHAAETMAKVLNTSLELSMNALDIISGLSEVADAFGFDTILGSAVQDNGTVNTTHDQAHHGNENTSSRKLLQSLPSWVSDSHHRHHLARAAAGAAHVKPDVVVAQDGTGQFTTLTEALTAVPRNNRKPYVIYVKAGIYNEIVKIPKQSSYITIIGDGPTRTRFTGNLNYADGVQTYNTATFAVNGPYFTAMHVGFENSAGAIKHQAVALRVTADKAVFYNCHMDGYQDTLYAQSHRQFYRDCLISGTIDFIFGDADMVFQNCALVVRQPLSNQNSIVSASGRNVINSPSAMVFQSCRFIGDELYLSDAKKKPAYLGRPWRAYAKVVIMDSQIDGIFAPEGYLSWMGSIYHLTSVFNEYNNKGPGADASHRVKWPGVKTITAVQAANFYPRKFYEFHNATTSDDDSWISASGIPYSAGPM 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0943 601 FunFam Pectinesterase 4 279 600 - -
Acco04g0943 601 SMART PMEI_2 53 206 IPR006501 GO:0004857
Acco04g0943 601 Pfam Plant invertase/pectin methylesterase inhibitor 58 206 IPR006501 GO:0004857
Acco04g0943 601 Gene3D - 276 599 IPR012334 -
Acco04g0943 601 FunFam Pectinesterase 54 211 - -
Acco04g0943 601 PANTHER PECTINESTERASE 19 590 - -
Acco04g0943 601 Pfam Pectinesterase 282 574 IPR000070 GO:0030599|GO:0042545
Acco04g0943 601 SUPERFAMILY Pectin lyase-like 279 598 IPR011050 -
Acco04g0943 601 CDD PMEI-like_3 61 211 - -
Acco04g0943 601 ProSitePatterns Pectinesterase signature 2. 426 435 IPR033131 -
Acco04g0943 601 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 210 IPR035513 -
Acco04g0943 601 NCBIfam pectinesterase inhibitor domain 53 210 IPR006501 GO:0004857
Acco04g0943 601 ProSitePatterns Pectinesterase signature 1. 307 326 IPR018040 -
Acco04g0943 601 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 211 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0943 Acco-ChrAcco04 8563608 8565687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0943 7 599 Carbohydrate Esterase AT3G05610 41.779 1.11e-168 494